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Series GSE133885 Query DataSets for GSE133885
Status Public on Mar 02, 2020
Title Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories
Organisms Brassica napus; Triticum aestivum
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32349780
Submission date Jul 05, 2019
Last update date May 08, 2020
Contact name Lorenzo Concia
E-mail(s) colore@gmail.com, concia@bio.ens.psl.eu
Phone 769929568
Organization name École Normale Supérieure
Department Institut de Biologie
Lab Plant and Algal Genomics Lab
Street address 46 Rue d'Ulm
City Paris
ZIP/Postal code 75020
Country France
 
Platforms (3)
GPL23509 Illumina HiSeq 4000 (Triticum aestivum)
GPL26889 Illumina NextSeq 500 (Triticum aestivum)
GPL26890 Illumina HiSeq 4000 (Brassica napus)
Samples (10)
GSM3929160 Wheat_ATAC_S1_001
GSM3929161 Wheat_CS_10-day_shoots_ChIP_RNAPII
GSM3929162 Rapeseed.Hi-C_M_18_0819_HiC-3_AD005_L006
This SuperSeries is composed of the following SubSeries:
GSE133879 Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Wheat_ATAC)
GSE133880 Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Wheat_ChIP)
GSE133881 Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Rapeseed_Hi-C)
Relations
BioProject PRJNA552868

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE133885_RAW.tar 70.9 Gb (http)(custom) TAR (of BIGWIG, NARROWPEAK, TSV, TXT)
SRA Run SelectorHelp

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