NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE133904 Query DataSets for GSE133904
Status Public on Jul 07, 2019
Title The Right Ventricular Fibroblast Secretome Drives Cardiomyocyte Dedifferentiation
Organisms Bos taurus; Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Rationale: In virtually all models of heart failure, prognosis is determined by right ventricular (RV) function; thus, understanding the cellular mechanisms contributing to RV dysfunction is critical. Whole organ remodeling is associated with cell-specific changes, including cardiomyocyte dedifferentiation and activation of cardiac fibroblasts (Cfib) which in turn is linked to disorganization of cytoskeletal proteins and loss of sarcomeric structures. However, how these cellular changes contribute to RV function remains unknown. We’ve previously shown significant organ-level RV dysfunction in a large animal model of pulmonary hypertension (PH) which was not mirrored by reduced function of isolated cardiomyocytes. We hypothesized that factors produced by the endogenous Cfib contribute to global RV dysfunction by generating a heterogeneous cellular environment populated by dedifferentiated cells.
Objective: To determine the effect of Cfib conditioned media (CM) from the PH calf (PH-CM) on adult rat ventricular myocytes (ARVM) in culture.
Methods and Results: Brief exposure (<2 days) to PH-CM results in rapid, marked dedifferentiation of ARVM to a neonatal-like phenotype exhibiting spontaneous contractile behavior. Dedifferentiated cells maintain viability for over 30 days with continued expression of cardiomyocyte proteins including TnI and α-actinin yet exhibit myofibroblast characteristics including expression of α-smooth muscle actin. Using a bioinformatics approach to identify factor(s) that contribute to dedifferentiation, we found activation of the PH Cfib results in a unique transcriptome correlating with factors both in the secretome and with activated pathways in the dedifferentiated myocyte. Further, we identified upregulation of periostin in the Cfib and CM, and demonstrate that periostin is sufficient to drive cardiomyocyte dedifferentiation.
Conclusions: These data suggest that paracrine factor(s) released by Cfib from the PH calf signal a phenotypic transformation in a population of cardiomyocytes that likely contributes to RV dysfunction. Therapies targeting this process, such as inhibition of periostin, have the potential to prevent RV dysfunction.
 
Overall design Two experiments were performed. The first was to identify transcriptome differences between bovine cardiac fibroblasts from high altitude animals to low altitude animals. The second experiment was to determine the effects of the fibroblast conditioned media from the high altitude animals on adult rat ventricular myocytes vs control, untreated cells.
 
Contributor(s) Tatman PD, Walker L
Citation(s) 31374110
Submission date Jul 06, 2019
Last update date Aug 20, 2019
Contact name Philip D Tatman
E-mail(s) philip.tatman@gmail.com
Organization name University of Colorado
Department Neurosurgery
Street address 12631 E. 17th Ave, C307
City Aurora
State/province Colorado
ZIP/Postal code 80011
Country USA
 
Platforms (2)
GPL15749 Illumina HiSeq 2000 (Bos taurus)
GPL22396 Illumina HiSeq 4000 (Rattus norvegicus)
Samples (12)
GSM3929506 arvm_con4
GSM3929507 arvm_con5
GSM3929508 arvm_con6
Relations
BioProject PRJNA552980
SRA SRP213350

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE133904_arvm_rnaseq.csv.gz 300.4 Kb (ftp)(http) CSV
GSE133904_final_genes_fibroblasts.csv.gz 56.1 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap