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Series GSE134321 Query DataSets for GSE134321
Status Public on Oct 01, 2019
Title Filamentation is Associated with Reduced Pathogenicity of Multiple Non-albicans Candida Species
Organisms Candida parapsilosis; Candida tropicalis
Experiment type Expression profiling by high throughput sequencing
Summary Candidiasis affects a wide variety of immunocompromised individuals, including HIV/AIDS patients and cancer patients on chemotherapy. Candida albicans, a major human fungal pathogen, accounts for about 50% of all cases, while the remainder are caused by the less pathogenic non-albicans Candida species (NACS). These species are believed to be less pathogenic, in part, because they do not filament as readily or robustly as C. albicans, although definitive evidence is lacking. To address this question, we used strains for two NACS, Candida tropicalis and Candida parapsilosis, that are genetically engineered to constitutively express the key transcriptional regulator UME6 and drive strong filamentation both in vitro and during infection in vivo. Unexpectedly, both strains showed a dramatic reduction in organ fungal burden and clearance of infection in response to UME6 expression. Consistent with these findings, we observed that a C. tropicalis hyperfilamentous mutant was significantly reduced and a filamentation-defective mutant was slightly increased for organ fungal burden. Comprehensive immune profiling did not reveal any significant changes in the host immune response to UME6 expression in the NACS. Interestingly, however, whole-genome transcriptional profiling indicated that while genes important for filamentation were induced by UME6 expression in C. tropicalis and C. parapsilosis, other genes involved in a variety of processes important for pathogenesis were strongly down-regulated. Our findings are significant because they suggest fundamental evolutionary differences in the relationship between morphology and pathogenicity among Candida species and that NACS do not necessarily possess the same virulence properties as C. albicans.
 
Overall design Examination of gene expression in 2 strains under 2 conditions (presence and absence of doxycycline (Dox)) for 2 Candida species. There are two biological replicates for each strain grown under each condition (16 samples total).
 
Contributor(s) Kadosh D
Citation(s) 31619502
Submission date Jul 15, 2019
Last update date Oct 29, 2019
Contact name Yidong Chen
E-mail(s) cheny8@uthscsa.edu
Phone 2105629163
Organization name UT Health Science Center at San Antonio
Department Population Health Sciences
Street address 8403 Floyd Curl Drive, MSC 7784
City San Antonio
State/province Texas
ZIP/Postal code 78229
Country USA
 
Platforms (2)
GPL18663 Illumina HiSeq 2000 (Candida parapsilosis)
GPL21876 Illumina HiSeq 2000 (Candida tropicalis)
Samples (16)
GSM3942171 tetO-CtUME6 +Dox rep. #1
GSM3942172 tetO-CtUME6 -Dox rep. #1
GSM3942173 tetO-CtUME6 +Dox rep. #2
Relations
BioProject PRJNA554699
SRA SRP214726

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE134321_RAW.tar 470.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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