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Series GSE134792 Query DataSets for GSE134792
Status Public on Jul 25, 2019
Title Molecular and immunological interrogation of a live-attenuated enterotoxigenic Escherichia coli vaccine highlights features unique to wild type infection
Platform organism Escherichia coli
Sample organism Homo sapiens
Experiment type Protein profiling by protein array
Summary Enterotoxigenic Escherichia coli (ETEC) infections are a common cause of diarrheal illness in low- and middle-income countries. The live-attenuated ACE527 vaccine, adjuvanted with double mutant LT (dmLT), affords clear but partial protection against ETEC challenge inhuman volunteers. Comparatively, initial wild-type ETEC challenge completely protects against severe diarrhea on homologous re-challenge...To investigate molecular determinants of protection, vaccine antigen content was compared to wild-type ETEC, and proteome microarrays were used to assess immune responses following vaccination and ETEC challenge... Although molecular interrogation of the vaccine confirmed expression of targeted canonical antigens, relative to wild-type ETEC, vaccine strains were deficient in production of flagellar antigens, immotile, and lacked production of the EtpA adhesin. Similarly, vaccination ± dmLT elicited responses to targeted canonical antigens, but relative to wild-type challenge, vaccine responses to some potentially protective non-canonical antigens including EtpA were diminished or absent...These studies highlight important differences in vaccine and wild-type ETEC antigen content and call attention to distinct immunologic signatures that could inform investigation of correlates of protection, and guide vaccine antigen selection for these pathogens of global importance.
 
Overall design A total of 250 ALS samples were analyzed from 36 subjects: 10 placebo, 13 ACE527 vaccinated, and 13 ACE527+dmLT vaccinated. The vaccine was administered at days 0, 28, and 56. Thirty four of the subjects have 7 samples taken at days 0, 7, 28, 35, 56, and 63 with respect to the first vaccination and another sample taken 7 days after challenge. The remaining two subjects are missing one sample day each.
 
Contributor(s) Chakraborty S, Randall A, Vickers TJ, Molina D, Harro CD, DeNearing B, Brubaker J, Sack DA, Bourgeois AL, Felgner PL, Liang X, Mani S, Wenzel H, Townsend RR, Gilmore PE, Darsley MJ, Rasko DA, Fleckenstein JM
Citation(s) 31482013
Submission date Jul 24, 2019
Last update date Sep 11, 2019
Contact name Arlo Zan Randall
E-mail(s) arandall@antigendiscovery.com
Organization name Antigen Discovery Inc
Street address 1 Technology Drive, Suite E309
City Irvine
State/province CA
ZIP/Postal code 92618
Country USA
 
Platforms (1)
GPL26932 Antigen Discovery Inc. ETEC Protein Array
Samples (250)
GSM3969764 JH0038.Day 7
GSM3969765 JH0038.Day 0
GSM3969766 JH0038.Day 63
Relations
BioProject PRJNA556424

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE134792_Normalized_Matrix.xlsx 10.7 Mb (ftp)(http) XLSX
GSE134792_Raw_Data_Matrix.xlsx 5.2 Mb (ftp)(http) XLSX
Processed data included within Sample table
Processed data are available on Series record

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