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Series GSE135228 Query DataSets for GSE135228
Status Public on Oct 22, 2019
Title The Cyclic AMP Receptor Protein Regulates Quorum Sensig and Global Gene Expression in Yersinia pestis During Planktonic Growth and Growth in Biofilms
Organism Yersinia pestis
Experiment type Expression profiling by high throughput sequencing
Summary We use RNA-seq to identify Crp-regulated, Biofilm-regulated and Glucose-regulated genes in Yersinia pestis grown in planktonic and biofilm growth states.
Overall design Comparing transcripts between Y. pestis and Y. pestis ∆crp growin in glucose, glycerol, in planktonic and biofilm states
Contributor(s) Ritzert JT, Satchell KJ
Citation(s) 31744922
Submission date Aug 01, 2019
Last update date Dec 10, 2019
Contact name Jeremy T Ritzert
Organization name Loyola University Chicago
Department Biology
Street address 1032 W. Sheridan Road
City Chicago
State/province IL
ZIP/Postal code 60660
Country USA
Platforms (1)
GPL27001 Illumina NextSeq 500 (Yersinia pestis)
Samples (6)
GSM3995465 WtPlankGlucose/259_P#
GSM3995466 WtPlankGlycerol/259_PG#
GSM3995467 WtBfilmGlucose/259_A#
BioProject PRJNA558013
SRA SRP217049

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Supplementary file Size Download File type/resource
GSE135228_Dataset1_Differentially_Expressed_mRNAs.xlsx 991.7 Kb (ftp)(http) XLSX
GSE135228_Dataset2_Differentially_Expressed_sRNAs.xlsx 183.6 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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