|
| Status |
Public on Nov 25, 2019 |
| Title |
Anaerobic degradation of syringic acid by an adapted strain of Rhodopseudomonas palustris |
| Organism |
Rhodopseudomonas palustris |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Rhodopseudomonas palustris strain SA008.1.07 can use syringic acid as sole organic carbon source anaerobically. Grew all anaerobically in various carbon sources: syringic acid, succinate, and p-hydroxybenzoic acid.
|
| |
|
| Overall design |
Strain comparison of R. palustris during anaerobic growth on various carbon sources.
|
| |
|
| Contributor(s) |
Oshlag JZ, Ma Y, Morse K, Burger B, Lemke R, Karlen SD, Myers KS, Donohue TJ, Noguera DR |
| Citation(s) |
31732577 |
| |
| Submission date |
Aug 09, 2019 |
| Last update date |
Feb 10, 2020 |
| Contact name |
Kevin S Myers |
| E-mail(s) |
kmyers2@wisc.edu
|
| Organization name |
University of Wisconsin - Madison
|
| Department |
Great Lakes Bioenergy Research Center
|
| Street address |
5127 WEI, 1552 University Ave
|
| City |
Madison |
| State/province |
WI |
| ZIP/Postal code |
53726 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL27030 |
Illumina HiSeq 2500 (Rhodopseudomonas palustris) |
| GPL27031 |
Illumina NextSeq 500 (Rhodopseudomonas palustris) |
|
| Samples (9)
|
|
| Relations |
| BioProject |
PRJNA559514 |
| SRA |
SRP217930 |
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