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Series GSE13567 Query DataSets for GSE13567
Status Public on Mar 30, 2009
Title US28-expressing and mock-transfected stable NIH-3T3 cell lines
Organism Mus musculus
Experiment type Expression profiling by array
Summary The human cytomegalovirus (HCMV) encodes the chemokine receptor US28 that exhibits constitutive activity. NIH-3T3 cells stably transfected with US28 present a pro-angiogenic and transformed phenotype both in vitro and in vivo.
We used gene expression profiling to determine how US28 constitutive activity modulates expression of genes compared to mock-transfected cells.

Keywords: Comparison of stably transfected cell lines
 
Overall design We isolated RNA from two different clonal stable cell lines of NIH-3T3 cells transfected either either mock or US28-WT and analysed these 4 RNA samples using Affymetrix mouse genome arrays.
 
Contributor(s) Maussang D, Langemeijer E, Fitzsimons CP, Stigter-van Walsum M, Dijkman R, Borg MK, Slinger E, Schreiber A, Michel D, Tensen CP, van Dongen GA, Leurs R, Smit MJ
Citation(s) 19318580
Submission date Nov 12, 2008
Last update date Feb 11, 2019
Contact name David Maussang
E-mail(s) dmaussa@few.vu.nl
Organization name Vrije Universiteit Amsterdam, Leiden/Amsterdam Center for Drug Research
Department Division of Medicinal Chemistry, Faculty of Sciences
Lab Martine J Smit/Rob Leurs
Street address De Boelelaan 1083
City Amsterdam
ZIP/Postal code 1081 HV
Country Netherlands
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (4)
GSM341571 Mock (clone 12)
GSM341572 Mock (clone 13)
GSM341573 US28-WT (clone 9)
Relations
BioProject PRJNA110669

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE13567_RAW.tar 16.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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