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| Status |
Public on Aug 18, 2022 |
| Title |
Skin transcriptome profiles associated with black- and white-coated region in a crossbred goat |
| Organism |
Capra hircus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
we compared the skin transcriptomes of the black- and white-coated region from the Boer and Macheng Black crossbred goat with black head and white body using the Illumina RNA-Seq method. Six cDNA libraries derived from skin samples of the white coat region (n = 3) and black coat region (n = 3) were constructed from three full-sib goats. On average, we obtained approximately 76.5 and 73.5 million reads for each skin sample of black coat and white coat, respectively, of which 75.39% and 76.05% reads were covered in the genome database. Our study provides insight into the transcriptional regulation of two distinct coat color that might serve as a key resource for understanding coat color pigmentation of goat.
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| Overall design |
Examination of 2 different coat region in a crossbred goat.
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| Contributor(s) |
Xiong Q, Chen M |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Aug 19, 2019 |
| Last update date |
Aug 18, 2022 |
| Contact name |
Qi Xiong |
| E-mail(s) |
raul_love@126.com
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| Organization name |
Institute of Animal Husbandry and Veterinary, Hubei Academy of Agricultural Sciences
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| Street address |
No.1 Nanhu Yaoyuan, Shizisanjie, Hongsan D
|
| City |
Wuhan |
| ZIP/Postal code |
430064 |
| Country |
China |
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| Platforms (1) |
| GPL27106 |
Illumina NovaSeq 6000 (Capra hircus) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA560789 |
| SRA |
SRP218725 |
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