|
| Status |
Public on Jun 16, 2020 |
| Title |
Transcriptome profiling of medaka timecourse embryonic samples and adult tissues samples. |
| Organism |
Oryzias latipes |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We collected ten embryonic stages covering cleavage, blastula, gastrula, somite, and late stages until hatching. We also collected two adult tissue samples, including ovary and testis. 13 samples were sequenced using the illumina short-read sequencing platform.
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| |
|
| Overall design |
Total RNA was extracted from medaka whole embryo samples of 11 developmental stages and 2 adult tissues. Short-read strand-specific library was constructed and sequenced using Illumina platform.
|
| |
|
| Contributor(s) |
Li Y, Tu Q |
| Citation(s) |
32591361 |
| |
| Submission date |
Aug 19, 2019 |
| Last update date |
Jul 27, 2020 |
| Contact name |
Qiang Tu |
| E-mail(s) |
qtu@genetics.ac.cn
|
| Organization name |
Institute of Genetics and Developmental Biology
|
| Street address |
No.1 West Beichen Road,Chaoyang District
|
| City |
Beijing |
| ZIP/Postal code |
100101 |
| Country |
China |
| |
|
| Platforms (2) |
| GPL17089 |
Illumina HiSeq 2000 (Oryzias latipes) |
| GPL25587 |
HiSeq X Ten (Oryzias latipes) |
|
| Samples (24)
|
|
| Relations |
| BioProject |
PRJNA560946 |
| SRA |
SRP218855 |
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