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Series GSE137477 Query DataSets for GSE137477
Status Public on Apr 13, 2020
Title Dynamics of the 4D genome during in vivo lineage specification and differentiation
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32483172
Submission date Sep 16, 2019
Last update date Jun 05, 2020
Contact name A Marieke Oudelaar
E-mail(s) marieke.oudelaar@imm.ox.ac.uk
Organization name University of Oxford
Department MRC Weatherall Institute of Molecular Medicine
Street address John Radcliffe Hospital
City Oxford
ZIP/Postal code OX3 9DS
Country United Kingdom
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (94)
GSM4067179 Erythroid differentiation S0-low ATAC-seq replicate 2.1
GSM4067180 Erythroid differentiation S0-low ATAC-seq replicate 2.2
GSM4067181 Erythroid differentiation S0-medium ATAC-seq replicate 2.1
This SuperSeries is composed of the following SubSeries:
GSE137114 Dissection of the 4D chromatin structure of the alpha-globin locus through in vivo erythroid differentiation with extreme spatial and temporal resolution [ATAC-seq]
GSE137199 Dissection of the 4D chromatin structure of the alpha-globin locus through in vivo erythroid differentiation with extreme spatial and temporal resolution [Tiled-C]
GSE137476 Dissection of the 4D chromatin structure of the alpha-globin locus through in vivo erythroid differentiation with extreme spatial and temporal resolution [CITE-seq]
Relations
BioProject PRJNA565844

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE137477_RAW.tar 48.3 Mb (http)(custom) TAR (of MTX, TSV, TXT)
SRA Run SelectorHelp

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