|
| Status |
Public on Dec 25, 2019 |
| Title |
Vascular fate in misidentified pluripotent-derived blood-brain-barrier endothelial cells rescued by transcriptional reprogramming. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
A single-cell suspension was loaded into the Bio-Rad ddSEQ Single-Cell Isolator on which cells were isolated, lysed and barcoded in droplets. Droplets were then disrupted and cDNA was pooled for second strand synthesis. Libraries were generated with direct tagmentation followed by 3’ enrichment and sample indexing using Illumina Nextera library prep kit. Pooled libraries were sequenced on the Illumina NextSeq500 sequencer. Sequencing data were primarily analyzed using the SureCell RNA Single-Cell App in Illumina BaseSpace Sequence Hub.
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| |
|
| Overall design |
Cell samples were harvested from in vitro culture conditions and sequenced using Illumina NextSeq500.
|
| |
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| Contributor(s) |
Lu TM, Houghton S, Rafii S, Agalliu D, Redmond D, Lis R |
| Citation(s) |
33542154 |
| |
| Submission date |
Sep 25, 2019 |
| Last update date |
Feb 18, 2021 |
| Contact name |
Tyler Lu |
| E-mail(s) |
tyl2002@med.cornell.edu
|
| Phone |
9089383803
|
| Organization name |
Weill Cornell Medicine
|
| Street address |
1300 York Avenue
|
| City |
New York |
| State/province |
New York |
| ZIP/Postal code |
10065 |
| Country |
USA |
| |
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| Platforms (1) |
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| Samples (28)
|
|
| Relations |
| BioProject |
PRJNA574184 |
| SRA |
SRP223288 |
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