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Series GSE138155 Query DataSets for GSE138155
Status Public on Oct 01, 2019
Title GIRK1 triggers multiple cancer-related pathways in the benign mammary epithelial cell line MCF10A
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Excessive expression of subunit 1 of GIRK1 in ER+ breast tumors is associated with reduced survival times, and increased lymph node metastasis in patients. To investigate possible tumor-initiating properties, benign MCF10A and malign MCF7 mammary epithelial cells overexpressing GIRK1 were engineered, neoplasia associated vital parameters and resting potentials were measured and compared to controls. Presence of GIRK1 resulted in resting potentials negative to controls. Upon GIRK1 overexpression, several cellular pathways were sizably regulated towards pro-tumorigenic action as revealed by comparison of transcriptomes of MCF10AGIRK1 with control (MCF10AeGFP). According to transcriptome analysis, cellular migration was promoted while wound healing and extracellular matrix interactions were impaired. Vital parameters in MCF7 cells were affected akin the benign MCF10A lines, although to a lesser extent. Thus, GIRK1 overexpression will aid in classification of ER+ breast tumors and bears the potential to open a new window for the therapy of this detrimental disease.
 
Overall design Transcriptomes of two MCF10A cell lines stably overexpressing KCNJ3 (GIRK1) and of two control MCF10A lines were assesed
 
Contributor(s) Schratter G, Bauernhofer T, Schreibmayer W
Citation(s) 31848385
Submission date Sep 30, 2019
Last update date Dec 31, 2019
Contact name Wolfgang Schreibmayer
E-mail(s) W.Schreibmayer@gmx.at
Organization name Medical University of Graz
Department Biophysics
Lab Schreibmayer lab
Street address Neue Stiftingtalstrasse 6/D04
City Graz
State/province Styria
ZIP/Postal code A-8010
Country Austria
 
Platforms (1)
GPL23934 Ion Torrent S5 (Homo sapiens)
Samples (6)
GSM4101044 MCF10A cells, wt1
GSM4101045 MCF10A cells, wt2
GSM4101046 MCF10A cells, eGFP1
Relations
BioProject PRJNA574941
SRA SRP223697

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Supplementary file Size Download File type/resource
GSE138155_RAW.tar 7.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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