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Series GSE138497 Query DataSets for GSE138497
Status Public on Mar 08, 2020
Title Changes of Gene expression in Tartary Buckwheat (Fagopyrum tataricum) under Frozen stress [BS-Seq]
Organism Fagopyrum tataricum
Experiment type Methylation profiling by high throughput sequencing
Summary We performed a genome methylation analysis in Tartary Buckwheat (Fagopyrum tataricum) in different freezing treatments
 
Overall design whole-genome bisulphite sequencing, WGBS linked bisulfite conversion and second generation sequencing technology.The DNA methylation status of the whole genome can be detected efficiently at the level of single base resolution.
 
Contributor(s) Song Y, Jia Z
Citation(s) 33365044
Submission date Oct 07, 2019
Last update date Jan 04, 2021
Contact name Yuan Song
E-mail(s) 421771569@qq.com
Phone 86-0931-8912560
Organization name Lanzhou university
Street address the south of Tianshui road
City Lanzhou
ZIP/Postal code 730000
Country China
 
Platforms (1)
GPL24740 Illumina HiSeq 4000 (Fagopyrum tataricum)
Samples (3)
GSM4109896 control
GSM4109897 memory
GSM4109898 shock
This SubSeries is part of SuperSeries:
GSE138547 Changes of Gene expression in Tartary Buckwheat (Fagopyrum tataricum) under Frozen stress
Relations
BioProject PRJNA576203
SRA SRP224604

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138497_1.1_ReadsQC.xlsx 8.9 Kb (ftp)(http) XLSX
GSE138497_2.1_Mapping_Stats.xlsx 9.0 Kb (ftp)(http) XLSX
GSE138497_DMRMethylGeneFeatures.xlsx 10.5 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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