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| Status |
Public on Oct 08, 2022 |
| Title |
Transcriptome analysis of Bifidobacterium adolescentis P2P3 cultivated with resistant starch |
| Organism |
Bifidobacterium adolescentis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq based transcriptome analysis was employed to understand the genome-wide expression patterns under cultivation with resistant starch (RS). To identify differentially expressed genes, we compared RS-induced transcriptome to non-RS transcriptome as sole carbon source.
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| Overall design |
Eight libraries constructed: Each two replicates of growth conditions (GLC, SS, GRS, and RS ) in Bifidobacterium adolescentis P2P3
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| Contributor(s) |
Jung D, Lee H, Seo Y, Park C |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Oct 08, 2019 |
| Last update date |
Oct 10, 2022 |
| Contact name |
Jungwook Park |
| E-mail(s) |
jjuwoogi@pusan.ac.kr
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| Organization name |
Pusan National University
|
| Department |
Microbiology
|
| Street address |
Pusan National University, 2, Busandaehak-ro 63beon-gil, Geumjeong-gu, Busan 609-735, Korea
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| City |
Busan |
| ZIP/Postal code |
ASI|KR|KS012|PUSAN |
| Country |
South Korea |
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| Platforms (1) |
| GPL27584 |
Illumina HiSeq 4000 (Bifidobacterium adolescentis) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA576465 |
| SRA |
SRP224792 |
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