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Series GSE138603 Query DataSets for GSE138603
Status Public on Jul 10, 2020
Title Response of expanded human conventional and regulatory T cells to CD3/CD28-mediated activation [Exp1]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Immune responses depend on a dynamic balance between the opposing activities of conventional (Tconv) and regulatory (Treg) CD4+ T cells. While receptor-targeted approaches have been developed based on their modulation of Tconv cells, Tconv and Treg cells share many costimulatory receptors. We aim to determine key differential signaling events downstream of costimulation to find opportunities for selective manipulation of Tconv or Treg cells. This data set includes the transcriptomes of expanded human Tconv and Treg cells that were either unstimulated or treated with anti-CD3/CD28 agonistic mAbs for 24 hours.
 
Overall design Whole transcriptome analysis of expanded human conventional and regulatory T cells that were either unstimulated or treated with anti-CD3/CD28 agonistic mAbs (four healthy blood donors).
 
Contributor(s) de Kivit S, Mensink M, Borst J
Citation(s) 32958937
Submission date Oct 08, 2019
Last update date Jan 09, 2024
Contact name Mark Mensink
E-mail(s) m.mensink@lumc.nl
Organization name Leiden University Medical Center
Department Immunology
Street address Albinusdreef 2
City Leiden
ZIP/Postal code 2333ZA
Country Netherlands
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (16)
GSM4114151 Tconv_unstimulated_Donor1
GSM4114152 Tconv_CD3-CD28_Donor1
GSM4114153 Treg_unstimulated_Donor1
This SubSeries is part of SuperSeries:
GSE138605 Response of expanded human conventional and regulatory T cells to CD3/CD28-mediated activation (Exp1) and to CD28 or TNFR2 costimulation (Exp2)
Relations
BioProject PRJNA576498
SRA SRP224823

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Supplementary file Size Download File type/resource
GSE138603_readcounts.txt.gz 1.3 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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