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Series GSE139612 Query DataSets for GSE139612
Status Public on Apr 22, 2020
Title Transcriptomic Analysis of Inflammatory Responses in Bovine Mammary Epithelial Cells following Stimulation with Escherichia coli and Staphylococcus aureus
Organism Bos taurus
Experiment type Expression profiling by array
Summary Bovine mastitis, an inflammatory reaction of the mammary gland, is commonly caused by Staphylococcus aureus or Escherichia coli infections in high-yielding dairy cows. Immunotranscriptomic responses of bovine mammary epithelial cell (bMEC) are pivotal for the understanding of the defense against invading pathogens, and for the fate of udder inflammation. The intracellular chemotaxic protein Cyclophilin A (CyPA), secreted by bMEC during inflammatory reaction is being considered as a marker for the early diagnosis of mastitis. Taken together, the present study aimed to investigate the microarray-based transcriptome alterations in bMEC after in vitro infection with two S. aureus strains (S. aureus JE2 and S. aureus SA003) or E. coli crude lipopolysaccharide (LPS). In addition, the CyPA-induced expression changes of selected cytokine and chemokines were evaluated by qRT-PCR. Differential expression analysis identified 447, 465 and 520 differentially expressed genes (DEGs) in bMEC after LPS, S. aureus JE2 and S. aureus SA003 stimulation, respectively. LPS-induced DEGs are involved in the activation of cytokine-cytokine receptors interaction, NOD-like receptor signaling, chemokine signaling, interleukin-1 signaling and Toll-like receptor signaling pathway; while S. aureus induced DEGs were involved in the enrichment of neuroactive ligand-receptor interaction, GPCR signaling, cytokine-cytokine receptor interaction, and JAK-STAT pathway. A major differential inflammatory response to LPS and S. aureus treatments was the activation of the chemokine signaling pathway by LPS but not either by S. aureus JE2 or SA003. Unlike the S. aureus strains, LPS stimulation resulted significant upregulation of CCL2, CXCL2, CXCL3, CXCL5, CXCL8, CXCL9, IL1A and IL1B that are known to target mononuclear leukocytes, and could induce systemic inflammation. CyPA stimulation was able to upregulate chemokines (CXCL2, CXCL3, CXCL8, IL1A and IL1B) expression in bMEC indicating its ability to promote inflammation. Several of the LPS-induced DEGs were found to have transcription factor binding sites, and their expressions were also predicted to be regulated by sets of microRNAs. The transcriptional alterations associated with inflammatory response in this study may reflect immunomodulatory mechanisms underlying the interaction of bMEC with E. coli and S. aureus during mastitis.
 
Overall design Gene expression changes in bovine mammary epitheial cells (bMEC) was measured after 12 h of E. coli derived lipopolysaccharides (LPS), Staphylococcus aureus SA003, and Staphylococcus aureus JE2 stimulations, respectively. Single sample was generated in each of three cases along with a non-stimulated control.
 
Contributor(s) Islam A, Takagi M, Villena J, Aso H, Kitazawa H
Citation(s) 32182886
Submission date Oct 30, 2019
Last update date Apr 22, 2020
Contact name Haruki Kitazawa
E-mail(s) haruki.kitazawa.c7@tohoku.ac.jp
Phone +81-22-757-4373
Organization name Tohoku University
Street address 468-1 Aramaki Aza Aoba, Aoba-ku,, Sendai
City Sendai
State/province Miyagi
ZIP/Postal code 980-0845
Country Japan
 
Platforms (1)
GPL11648 Agilent-023647 B. taurus (Bovine) Oligo Microarray v2 (Feature Number version)
Samples (4)
GSM4144695 BovineMammaryEpithelialCells_12h_Without_stimulation_rep1
GSM4144696 BovineMammaryEpithelialCells_12h_LPS_stimulation_rep1
GSM4144697 BovineMammaryEpithelialCells_12h_S aureus SA003_stimulation_rep1
Relations
BioProject PRJNA580483

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE139612_RAW.tar 36.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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