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| Status |
Public on May 16, 2004 |
| Title |
LPS-induced and E. coli-induced gene expression in wildtype and MyD88-/- mouse macrophages |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
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| Summary |
Comparison of gene expression in wildtype and MyD88-/- C57BL/6J mouse macrophages treated with 10 ng/mL LPS for 2 hours versus media treated control macrophages, and, wildtype and MyD88-/- C57BL/6J mouse macrophages treated with live E. coli bacteria (log phase; 1 bact per 1 macrophage) for 2 hours versus media treated control macrophages. Cells from 4 mice of each geneotype were used and each individual provided its own control. Hybridizations of treated and control samples from each mouse were dye swap replicated. Wildtype macrophages treated with LPS vs control (GSM22617-GSM22623,GSM22625), MyD88-/- macrophages treated with LPS vs control (GSM22626-GSM22632), wldtype macrophages treated with E. coli vs control (GSM22633-GSM22640, and MyD88-/- macrophages treated with E. coli vs control (GSM22641-GSM22648).
Keywords: other
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| Web link |
http://pga.mgh.harvard.edu
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| Contributor(s) |
Bjorkbacka H |
| Citation(s) |
15367722 |
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| Submission date |
May 14, 2004 |
| Last update date |
Mar 15, 2012 |
| Contact name |
Harry Björkbacka |
| E-mail(s) |
harry.bjorkbacka@med.lu.se
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| URL |
http://www.med.lu.se/expcard
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| Organization name |
Lund University
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| Department |
Dept. of Clinical Sciences, Malmö
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| Lab |
Experimental Cardiovascular Research Unit
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| Street address |
CRC 91:12, UMAS entrance 72
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| City |
Malmö |
| ZIP/Postal code |
205 02 |
| Country |
Sweden |
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| Platforms (1) |
| GPL1226 |
Mouse 13.4K long oligonucleotide array (Operon) 9.10.2002v2 |
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| Samples (31)
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| GSM22617 |
Wildtype macrophages, LPS vs. Mock, mouse 1, dye swap |
| GSM22618 |
Wildtype macrophages, LPS vs. Mock, mouse 1 |
| GSM22619 |
Wildtype macrophages, LPS vs. Mock, mouse 2, dye swap |
| GSM22620 |
Wildtype macrophages, LPS vs. Mock, mouse 2 |
| GSM22621 |
Wildtype macrophages, LPS vs. Mock, mouse 3, dye swap |
| GSM22622 |
Wildtype macrophages, LPS vs. Mock, mouse 3 |
| GSM22623 |
Wildtype macrophages, LPS vs. Mock, mouse 4, dye swap |
| GSM22625 |
Wildtype macrophages, LPS vs. Mock, mouse 4 |
| GSM22626 |
MyD88-/- macrophages, LPS vs. Mock, mouse 1, dye swap |
| GSM22627 |
MyD88-/- macrophages, LPS vs. Mock, mouse 1 |
| GSM22628 |
MyD88-/- macrophages, LPS vs. Mock, mouse 2, dye swap |
| GSM22629 |
MyD88-/- macrophages, LPS vs. Mock, mouse 2 |
| GSM22630 |
MyD88-/- macrophages, LPS vs. Mock, mouse 3, dye swap |
| GSM22631 |
MyD88-/- macrophages, LPS vs. Mock, mouse 3 |
| GSM22632 |
MyD88-/- macrophages, LPS vs. Mock, mouse 4 |
| GSM22633 |
WT macrophages, E. coli vs. Mock, mouse 1. dye swap |
| GSM22634 |
WT macrophages, E. coli vs. Mock, mouse 1 |
| GSM22635 |
WT macrophages, E. coli vs. Mock, mouse 2, dye swap |
| GSM22636 |
WT macrophages, E. coli vs. Mock, mouse 2 |
| GSM22637 |
WT macrophages, E. coli vs. Mock, mouse 3, dye swap |
| GSM22638 |
WT macrophages, E. coli vs. Mock, mouse 3 |
| GSM22639 |
WT macrophages, E. coli vs. Mock, mouse 4, dye swap |
| GSM22640 |
WT macrophages, E. coli vs. Mock, mouse 4 |
| GSM22641 |
MyD88-/- macrophages, E. coli vs. Mock, mouse 1, dye swap |
| GSM22642 |
MyD88-/- macrophages, E. coli vs. Mock, mouse 1 |
| GSM22643 |
MyD88-/- macrophages, E. coli vs. Mock, mouse 2, dye swap |
| GSM22644 |
MyD88-/- macrophages, E. coli vs. Mock, mouse 2 |
| GSM22645 |
MyD88-/- macrophages, E. coli vs. Mock, mouse 3, dye swap |
| GSM22646 |
MyD88-/- macrophages, E. coli vs. Mock, mouse 3 |
| GSM22647 |
MyD88-/- macrophages, E. coli vs. Mock, mouse 4, dye swap |
| GSM22648 |
MyD88-/- macrophages, E. coli vs. Mock, mouse 4 |
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| Relations |
| BioProject |
PRJNA90189 |
| Supplementary data files not provided |
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