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GEO accession:
Series GSE142315
Query DataSets for GSE142315
Status
Public on Jan 11, 2020
Title
Induction of Recurrent Break Cluster Genes in Neural Progenitor Cells Differentiated from Embryonic Stem Cells In Culture
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
32332169
Submission date
Dec 18, 2019
Last update date
May 08, 2020
Contact name
Frederick W Alt
E-mail(s)
jianqiao.hu@childrens.harvard.edu
Organization name
Boston Children's Hospital
Department
PCMM
Lab
Alt
Street address
1 Blackfan Circle
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platforms (3)
GPL16417
Illumina MiSeq (Mus musculus)
GPL21493
Illumina HiSeq 3000 (Mus musculus)
GPL21626
NextSeq 550 (Mus musculus)
Samples (116)
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More...
GSM4224496
ESC line1 Chr7_APH_ExpA
GSM4224497
ESC line1 Chr7_APH_ExpB
GSM4224498
ESC line1 Chr7_APH_ExpC
GSM4224499
ESC line1 Chr7_APH_ExpD
GSM4224500
ESC line1 Chr7_APH_ExpE
GSM4224501
ESC line1 Chr7_APH_ExpF
GSM4224502
ESC line1 Chr7_APH_ExpG
GSM4224503
ESC line1 Chr7_APH_ExpH
GSM4224504
ESC line1 Chr7_DMSO_ExpA
GSM4224505
ESC line1 Chr7_DMSO_ExpB
GSM4224506
ESC line1 Chr7_DMSO_ExpC
GSM4224507
ESC line1 Chr7_DMSO_ExpD
GSM4224508
ESC line1 Chr7_DMSO_ExpE
GSM4224509
ESC line1 Chr7_DMSO_ExpF
GSM4224510
ESC line1 Chr7_DMSO_ExpG
GSM4224511
ESC line1 Chr7_DMSO_ExpH
GSM4224512
ESC line1 Chr12_APH_ExpA
GSM4224513
ESC line1 Chr12_APH_ExpB
GSM4224514
ESC line1 Chr12_APH_ExpC
GSM4224515
ESC line1 Chr12_APH_ExpD
GSM4224516
ESC line1 Chr12_DMSO_ExpA
GSM4224517
ESC line1 Chr12_DMSO_ExpB
GSM4224518
ESC line1 Chr12_DMSO_ExpC
GSM4224519
ESC line1 Chr12_DMSO_ExpD
GSM4224520
ESC line1 Chr15_APH_ExpA
GSM4224521
ESC line1 Chr15_APH_ExpB
GSM4224522
ESC line1 Chr15_APH_ExpC
GSM4224523
ESC line1 Chr15_APH_ExpD
GSM4224524
ESC line1 Chr15_DMSO_ExpA
GSM4224525
ESC line1 Chr15_DMSO_ExpB
GSM4224526
ESC line1 Chr15_DMSO_ExpC
GSM4224527
ESC line1 Chr15_DMSO_ExpD
GSM4224528
ESC-NPC line1 Chr7_APH_ExpA
GSM4224529
ESC-NPC line1 Chr7_APH_ExpB
GSM4224530
ESC-NPC line1 Chr7_APH_ExpC
GSM4224531
ESC-NPC line1 Chr7_APH_ExpD
GSM4224532
ESC-NPC line1 Chr7_DMSO_ExpA
GSM4224533
ESC-NPC line1 Chr7_DMSO_ExpB
GSM4224534
ESC-NPC line1 Chr7_DMSO_ExpC
GSM4224535
ESC-NPC line1 Chr7_DMSO_ExpD
GSM4224536
ESC-NPC line1 Chr12_APH_ExpA
GSM4224537
ESC-NPC line1 Chr12_APH_ExpB
GSM4224538
ESC-NPC line1 Chr12_APH_ExpC
GSM4224539
ESC-NPC line1 Chr12_APH_ExpD
GSM4224540
ESC-NPC line1 Chr12_DMSO_ExpA
GSM4224541
ESC-NPC line1 Chr12_DMSO_ExpB
GSM4224542
ESC-NPC line1 Chr12_DMSO_ExpC
GSM4224543
ESC-NPC line1 Chr12_DMSO_ExpD
GSM4224544
ESC-NPC line1 Chr15_APH_ExpA
GSM4224545
ESC-NPC line1 Chr15_APH_ExpB
GSM4224546
ESC-NPC line1 Chr15_APH_ExpC
GSM4224547
ESC-NPC line1 Chr15_APH_ExpD
GSM4224548
ESC-NPC line1 Chr15_DMSO_ExpA
GSM4224549
ESC-NPC line1 Chr15_DMSO_ExpB
GSM4224550
ESC-NPC line1 Chr15_DMSO_ExpC
GSM4224551
ESC-NPC line1 Chr15_DMSO_ExpD
GSM4224552
ESC line 2 Chr7_APH_ExpA
GSM4224553
ESC line 2 Chr7_APH_ExpB
GSM4224554
ESC line 2 Chr7_APH_ExpC
GSM4224555
ESC line 2 Chr7_APH_ExpD
GSM4224556
ESC line 2 Chr7_DMSO_ExpA
GSM4224557
ESC line 2 Chr7_DMSO_ExpB
GSM4224558
ESC line 2 Chr7_DMSO_ExpC
GSM4224559
ESC line 2 Chr7_DMSO_ExpD
GSM4224560
ESC line 2 Chr12_APH_ExpA
GSM4224561
ESC line 2 Chr12_APH_ExpB
GSM4224562
ESC line 2 Chr12_APH_ExpC
GSM4224563
ESC line 2 Chr12_APH_ExpD
GSM4224564
ESC line 2 Chr12_DMSO_ExpA
GSM4224565
ESC line 2 Chr12_DMSO_ExpB
GSM4224566
ESC line 2 Chr12_DMSO_ExpC
GSM4224567
ESC line 2 Chr12_DMSO_ExpD
GSM4224568
ESC line 2 Chr15_APH_ExpA
GSM4224569
ESC line 2 Chr15_APH_ExpB
GSM4224570
ESC line 2 Chr15_APH_ExpC
GSM4224571
ESC line 2 Chr15_APH_ExpD
GSM4224572
ESC line 2 Chr15_DMSO_ExpA
GSM4224573
ESC line 2 Chr15_DMSO_ExpB
GSM4224574
ESC line 2 Chr15_DMSO_ExpC
GSM4224575
ESC line 2 Chr15_DMSO_ExpD
GSM4224576
ESC-NPC line 2 Chr7_APH_ExpA
GSM4224577
ESC-NPC line 2 Chr7_APH_ExpB
GSM4224578
ESC-NPC line 2 Chr7_APH_ExpC
GSM4224579
ESC-NPC line 2 Chr7_APH_ExpD
GSM4224580
ESC-NPC line 2 Chr7_DMSO_ExpA
GSM4224581
ESC-NPC line 2 Chr7_DMSO_ExpB
GSM4224582
ESC-NPC line 2 Chr7_DMSO_ExpC
GSM4224583
ESC-NPC line 2 Chr7_DMSO_ExpD
GSM4224584
ESC-NPC line 2 Chr12_APH_ExpA
GSM4224585
ESC-NPC line 2 Chr12_APH_ExpB
GSM4224586
ESC-NPC line 2 Chr12_APH_ExpC
GSM4224587
ESC-NPC line 2 Chr12_APH_ExpD
GSM4224588
ESC-NPC line 2 Chr12_DMSO_ExpA
GSM4224589
ESC-NPC line 2 Chr12_DMSO_ExpB
GSM4224590
ESC-NPC line 2 Chr12_DMSO_ExpC
GSM4224591
ESC-NPC line 2 Chr12_DMSO_ExpD
GSM4224592
ESC-NPC line 2 Chr15_APH_ExpA
GSM4224593
ESC-NPC line 2 Chr15_APH_ExpB
GSM4224594
ESC-NPC line 2 Chr15_APH_ExpC
GSM4224595
ESC-NPC line 2 Chr15_APH_ExpD
GSM4224596
ESC-NPC line 2 Chr15_DMSO_ExpA
GSM4224597
ESC-NPC line 2 Chr15_DMSO_ExpB
GSM4224598
ESC-NPC line 2 Chr15_DMSO_ExpC
GSM4224599
ESC-NPC line 2 Chr15_DMSO_ExpD
GSM4225082
ESC_line1_Exp1
GSM4225083
ESC_line1_Exp2
GSM4225084
ESC_line1_Exp3
GSM4225085
ESC_NPC_line1_Exp1
GSM4225086
ESC_NPC_line1_Exp2
GSM4225087
ESC_NPC_line1_Exp3
GSM4225088
ESC_line2_Exp1
GSM4225089
ESC_line2_Exp2
GSM4225090
ESC_line2_Exp3
GSM4225091
ESC_NPC_line2_Exp1
GSM4225092
ESC_NPC_line2_Exp2
GSM4225093
ESC_NPC_line2_Exp3
This SuperSeries is composed of the following SubSeries:
GSE142289
Induction of Recurrent Break Cluster Genes in Neural Progenitor Cells Differentiated from Embryonic Stem Cells In Culture [HTGTS-Seq]
GSE142312
Induction of Recurrent Break Cluster Genes in Neural Progenitor Cells Differentiated from Embryonic Stem Cells In Culture [GRO-seq]
Relations
BioProject
PRJNA596537
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE142315_RAW.tar
2.5 Gb
(http)
(custom)
TAR (of BW)
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