NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE142379 Query DataSets for GSE142379
Status Public on Sep 06, 2020
Title Diversification of posterior Hox patterning by graded ability to engage inaccessible chromatin
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 33028607
Submission date Dec 19, 2019
Last update date Dec 06, 2020
Contact name Shaun Mahony
E-mail(s) mahony@psu.edu
Phone 814-865-3008
Organization name Penn State University
Department Biochemistry & Molecular Biology
Lab Shaun Mahony
Street address 404 South Frear Bldg
City University Park
State/province PA
ZIP/Postal code 16802
Country USA
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (70)
GSM4226424 ATACseq in EB_replicate1
GSM4226425 ATACseq in EB_replicate2
GSM4226426 ATACseq in EB-Day2[D0+RA+SAG]_replicate1
This SuperSeries is composed of the following SubSeries:
GSE142375 Diversification of posterior Hox patterning by graded ability to engage inaccessible chromatin [ATAC-seq]
GSE142377 Diversification of posterior Hox patterning by graded ability to engage inaccessible chromatin [ChIP-seq]
GSE142378 Diversification of posterior Hox patterning by graded ability to engage inaccessible chromatin [RNA-seq]
Relations
BioProject PRJNA596775

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE142379_RAW.tar 46.5 Mb (http)(custom) TAR (of BED, TXT)
SRA Run SelectorHelp
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap