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Series GSE142548 Query DataSets for GSE142548
Status Public on Dec 20, 2022
Title Direct Reprogramming of Fibroblasts into Functional Mammary Epithelial cells by small molecules (RNAseq)
Organism Capra hircus
Experiment type Expression profiling by high throughput sequencing
Summary Mammary epithelial cells (MECs), the only cell type which could be capable of secreting milk in mammary gland, can be applied for the generation of transgenic mammary cell/gland bioreactor. However, continuously achieving large amount of high-quality goat MECs by non-invasion method, especially prepuberal MECs, in vitro has been a challenge. Here, we show that a small molecules cocktail enables the in vitro generation of chemically-induced mammary epithelial cells (CiMECs) with milk-secreting properties from goat ear fibroblasts. The properties of CiMECs were highly similar to those of naturally isolated MECs. Notably, the CiMECs lineage reprogramming process may partially imitate the MECs developmental process from embryonic to milk-secreting stages. Interestingly, fibroblasts were firstly reversed back to embryonic ectoderm/surface ectoderm-like state. Our findings constitute a substantial step toward further promoting the application of transgenic mammary bioreactors, moreover, also offer a new strategy for obtaining other cell types by reprogrammed fibroblasts.
 
Overall design The twenty three samples are analyzed. BERTV0d and GMECs are control group with three replicates. BFRTV1d/2d/3d/6d are treatment group with three replicates.BFRTV4d, BFRTV8d and CiMECs are treatment group with three replicates.
 
Contributor(s) Zhang D, Huang B
Citation(s) 37745843
Submission date Dec 23, 2019
Last update date Sep 27, 2023
Contact name ben huang
E-mail(s) benhuang@gxu.edu.cn
Organization name School of Animal Science and Technology, Guangxi University
Street address NO.100. DAXUE EAST RD, Nanning
City Guangxi
ZIP/Postal code 530004
Country China
 
Platforms (1)
GPL27106 Illumina NovaSeq 6000 (Capra hircus)
Samples (23)
GSM4231808 DF6_CK: BFRTV0d
GSM4231809 0809_DF7_ck_0d_1: BFRTV0d
GSM4231810 0809_DF7_ck_0d_2: BFRTV0d
This SubSeries is part of SuperSeries:
GSE142551 Direct Reprogramming of Fibroblasts into Functional Mammary Epithelial cells by small molecules
Relations
BioProject PRJNA597359
SRA SRP238620

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE142548_count.txt.gz 625.6 Kb (ftp)(http) TXT
GSE142548_fpkm.txt.gz 2.9 Mb (ftp)(http) TXT
GSE142548_gene.count.matrix.xls.gz 754.7 Kb (ftp)(http) XLS
GSE142548_gene.fpkm.matrix.xls.gz 837.4 Kb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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