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Series GSE142733 Query DataSets for GSE142733
Status Public on Dec 31, 2019
Title Systematic identification of long non-coding RNAs under allelopathic interference of PHBA in S. lycopersicum
Organism Solanum lycopersicum
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary In this study, we identifyed the LncRNAs expressed in S. lycopersicum leaves under different para-hydroxybenzoic acid concentration treatments.
 
Overall design The expression profiles of mRNAs and non-coding RNAs of leaves after 2 days of PHBA treatments and normal leaves
 
Contributor(s) Liang G
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 30, 2019
Last update date Dec 31, 2019
Contact name Liang Guoting
E-mail(s) lgt1984@wfust.edu.cn
Organization name Weifang University of Science and Technology
Street address No.1299, Jinguang street
City Shouguang
State/province Shandong
ZIP/Postal code 262700
Country China
 
Platforms (1)
GPL25655 Illumina HiSeq 4000 (Solanum lycopersicum)
Samples (9)
GSM4238348 CK_1
GSM4238349 CK_2
GSM4238350 CK_3
Relations
BioProject PRJNA598162
SRA SRP239079

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE142733_LncRNA.predicted.all.fa.gz 10.3 Mb (ftp)(http) FA
GSE142733_all_transcripts.FPKM.txt.gz 1.2 Mb (ftp)(http) TXT
GSE142733_all_transcripts.uniq.fa.gz 84.1 Mb (ftp)(http) FA
GSE142733_mRNA_annotation.txt.gz 1.2 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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