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Series GSE143825 Query DataSets for GSE143825
Status Public on Dec 31, 2020
Title The zinc cluster transcription factor Rha1 is a positive filamentation regulator in Candida albicans
Organism Candida albicans
Experiment type Expression profiling by high throughput sequencing
Summary The regulatory mechanism for filamentation includes a complex network of transcription factors that play roles in regulating hyphae associated genes. We identify here a new regulator of filamentation from the zinc cluster transcription factor family. We present evidence suggesting that this transcription factor assists the Nrg1/Brg1 switch regulating hyphal development.
 
Overall design Two biological replicates of both SC1604GAD1A and the Wild-type SC5314 strains were diluted to OD600=0.1 in YPD and inoculated to reach OD600 =0.8-1.
 
Contributor(s) Parvizi Omran R, Whiteway M
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Submission date Jan 16, 2020
Last update date Jan 02, 2021
Contact name Vanessa Dumeaux
E-mail(s) vanessadumeaux@gmail.com
Organization name Western University
Department Anatomy and Cell Biology
Street address Elgin Dr
City London
State/province Ontario
ZIP/Postal code N6G 2V4
Country Canada
 
Platforms (1)
GPL23041 Illumina MiSeq (Candida albicans)
Samples (4)
GSM4275091 WT_S1
GSM4275092 WT_S2
GSM4275093 Rha1-GOF_S1
Relations
BioProject PRJNA601775
SRA SRP242307

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE143825_RAW.tar 1.1 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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