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Series GSE144011 Query DataSets for GSE144011
Status Public on Jul 08, 2020
Title FoxO1 Binding in Cardiac Hypertrophy
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Anti-FoxO1 chromatin immunoprecipitation-high throughput sequencing (ChIP-Seq) was performed on mouse heart tissue following 7 days vehicle treatment/sham-operation, isoproterenol injection (subcutaneous, 3mg/kg/day), or transverse aortic constriction (TAC). Pool of 3 hearts per condition.
 
Overall design Mice were subjected to vehicle treatment/sham operation, isoproterenol treatment (subcutaneous, 3 mg/kg/day) or transverse aortic constriction (TAC) (n=3, pool per condition). Hearts were dissected, snap frozen, and sent to Active Motif for anti-FoxO1 ChIP-Seq.
 
Contributor(s) Pfleger J, Koch WJ
Citation(s) 32640834
Submission date Jan 21, 2020
Last update date Jul 11, 2020
Contact name Jessica Pfleger
E-mail(s) jessica.pfleger@temple.edu
Organization name Temple University
Street address 3500 North Broad Street
City Philadelphia
State/province PA
ZIP/Postal code 19140
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM4278011 FoxO1 ChIP-Seq Veh/Sham
GSM4278012 FoxO1 ChIP-Seq Iso
GSM4278013 FoxO1 ChIP-Seq TAC
Relations
BioProject PRJNA602497
SRA SRP243747

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144011_00HGTemple_Foxo1_mergedregs.xlsx 3.1 Mb (ftp)(http) XLSX
GSE144011_RAW.tar 315.9 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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