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Series GSE144420 Query DataSets for GSE144420
Status Public on Sep 08, 2020
Title Single cell analysis in the adult bone marrow vascular niche after Vegfc deletion
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To analyze the role of endothelial derived VEGF-C in the adult bone marrow vascular niche
 
Overall design We isolated ECs and LepR+ cells and analyzed in total 3 samples, aiming with all the samples at 3000-5000 cells.
 
Contributor(s) Fang S, Alitalo K
Citation(s) 32842144
Submission date Jan 28, 2020
Last update date Dec 08, 2020
Contact name Shentong Fang
E-mail(s) shentong.fang@helsinki.fi
Organization name Wihuri Research Institute and University of Helsinki
Street address Haartmaninkatu 8
City Helsinki
ZIP/Postal code 00290
Country Finland
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (3)
GSM4287857 NICHE_WT
GSM4287858 NICHE_FLOX
GSM4287859 NICHE_VC
Relations
BioProject PRJNA603585
SRA SRP245661

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144420_RAW.tar 124.7 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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