NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE145709 Query DataSets for GSE145709
Status Public on Sep 22, 2020
Title Transcriptomic data of leaves from eight sunflower lines and their sixteen hybrids under water deficit
Organism Helianthus annuus
Experiment type Expression profiling by high throughput sequencing
Summary Twenty-four sunflower genotypes were selected to represent genetic diversity within cultivated sunflower and included both inbred lines and their hybrids. Drought stress was applied to plants in pots at the vegetative stage using the high-throughput phenotyping platform Heliaphen. Here, we provide transcriptomics data from sunflower leaves. These data differentiate both treatment and the different genotypes and constitute a valuable resource to the community to study adaptation of crops to drought and the transcriptomic basis of heterosis.
 
Overall design Transcriptomic profiling of sunflower responses to drought including a large genetic variability
Web link https://doi.org/10.1051/ocl/2020044
 
Contributor(s) Gody L, Duruflé H, Blanchet N, Carré C, Legrand L, Mayjonade B, Munos S, Pomiès L, de Givry S, Langlade NB, Mangin B
Citation missing Has this study been published? Please login to update or notify GEO.
BioProject PRJNA345532
Submission date Feb 21, 2020
Last update date Jan 04, 2021
Contact name Ludovic Legrand
E-mail(s) ludovic.legrand@inra.fr
Organization name INRA/CNRS
Lab Laboratoire des Interactions Plantes-Microrganismes (LIPM)
Street address 24 Chemin de Borde Rouge
City Castanet-Tolosan
ZIP/Postal code 31326
Country France
 
Platforms (1)
GPL28178 Illumina HiSeq 2000 (Helianthus annuus)
Samples (142)
GSM4331293 RNA-Seq of Helianthus annuus SF009: control R1
GSM4331294 RNA-Seq of Helianthus annuus SF009: control R2
GSM4331295 RNA-Seq of Helianthus annuus SF009: control R3
Relations
SRA SRP245841

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE145709_13HP02_count.csv.gz 7.6 Mb (ftp)(http) CSV
GSE145709_13HP02_count_after_filtering.csv.gz 8.4 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap