|
| Status |
Public on Nov 03, 2020 |
| Title |
RORa expression is a critical checkpoint for the bifurcation of the T cell and ILC2 lineages in the embryonic thymus |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
33432227 |
| |
| Submission date |
Mar 10, 2020 |
| Last update date |
Feb 03, 2021 |
| Contact name |
Alastair Crisp |
| Organization name |
MRC Laboratory of Molecular Biology
|
| Street address |
Francis Crick Avenue
|
| City |
Cambridge |
| ZIP/Postal code |
CB2 0QH |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
|
| Samples (360)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE146740 |
Single cell RNA-seq (smartseq2) analysis of the ETP population from E15.5 embryonic thymus of the 5x polychromILC mice |
| GSE146741 |
Single cell RNA-seq (10X Chromium 3') analysis of the DN1 population from E15.5 embryonic thymus of the 5x polychromILC mice |
| GSE146742 |
Examination of gene expression in different populations of the embryonic thymus at E15.5 and E19.5 by bulk RNA-seq |
| GSE146743 |
Examination of RORa and GATA-3 binding sites in ILC2 by ChIP-seq |
| GSE146744 |
Examination of genomic accessibility in embryonic thymus cell populations by ATAC-seq |
|
| Relations |
| BioProject |
PRJNA611788 |
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