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Series GSE146884 Query DataSets for GSE146884
Status Public on Jul 08, 2020
Title An in vitro model of chronic wounding and its implication for age-related macular degeneration
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Age-related macular degeneration (AMD) is a leading cause of blindness in the developed world. In this study we investigated changes in differentated human retinal pigmented epithelial (RPE) cells to acute compared to chronic wounding. There are many interesting phenotypic and transcriptomic changes that occur after chronic wounding compared to acute wounding conditions which may have implications for AMD.
 
Overall design Examination of mRNA expression in acutely or chronicaly wounded human RPE cultures 5-hours, 24-hours and 8-days after final wound. Unwounded cultures served as controls.
 
Contributor(s) Bailey-Steinitz LJ, Shih Y, Radeke MJ, Coffey PJ
Citation(s) 32701996
Submission date Mar 12, 2020
Last update date Oct 07, 2020
Contact name Lindsay J Bailey-Steinitz
E-mail(s) ljbailey@ucsb.edu
Organization name University of California, Santa Barbara
Department MCDB, NRI
Lab Coffey
Street address 6131 Biological Sci Bldg II
City Santa Barbara
State/province CA
ZIP/Postal code 93106
Country USA
 
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (24)
GSM4408738 5H1Z_1
GSM4408739 5H1Z_2
GSM4408740 5H1Z_3
Relations
BioProject PRJNA612295
SRA SRP252574

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE146884_ECIS_Integer_Reads.txt.gz 494.1 Kb (ftp)(http) TXT
GSE146884_ECIS_Normalized_RPM.txt.gz 1.6 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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