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Series GSE146920 Query DataSets for GSE146920
Status Public on Jun 30, 2020
Title Quantitative translation of dog-to-human aging by conserved remodeling of the DNA methylome
Organism Canis lupus familiaris
Experiment type Methylation profiling by high throughput sequencing
Summary We generated sequencing data for 104 dogs using targeted-bisulfite sequencing with targets selected to the human 450K methylation array. Using these data, we identify a conserved methylation signature that can be used to quantitatively translate dog years to human years and also extends to mice.
 
Overall design Targetted bisulfite-sequencing of 104 dogs with DNA obtained from blood
 
Contributor(s) Wang T, Ideker T
Citation(s) 32619550
Submission date Mar 13, 2020
Last update date Sep 29, 2020
Contact name Tina Wang
Organization name University of California, San Diego
Street address 9500 Gilman Dr
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL24229 Illumina HiSeq 4000 (Canis lupus familiaris)
Samples (109)
GSM4409690 2266
GSM4409691 2270
GSM4409692 2477
Relations
BioProject PRJNA612432
SRA SRP252679

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE146920_Dog_Capture2_MethylationFraction.txt.gz 14.1 Mb (ftp)(http) TXT
GSE146920_Dog_MethylationFractions.txt.gz 23.8 Mb (ftp)(http) TXT
GSE146920_Dog_mapped_human_MethylationFractions.txt.gz 11.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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