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Series GSE147357 Query DataSets for GSE147357
Status Public on Mar 24, 2020
Title RNA-seq analysis on thymic stromal cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We performed RNA sequencing (RNA-seq) on thymic fibroblasts, thymic epithelial cells, endothelial cells, pericytes, dendritic cells, and lymph node fibroblastic reticular cells.
 
Overall design RNA-seq analysis on thymic stromal cells isolated from WT or LTbR-deficient mice.
 
Contributor(s) Nitta T
Citation(s) 32839611, 34096078
Submission date Mar 23, 2020
Last update date Aug 24, 2021
Contact name Takeshi Nitta
Organization name Graduate School of Medicine and Faculty of Medicine, The University of Tokyo
Department Department of Immunology,
Street address 7-3-1 Hongo, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platforms (1)
GPL18635 Ion Torrent Proton (Mus musculus)
Samples (52)
GSM4426900 Fraction1_gp38+
GSM4426901 Fraction5-6_gp38+
GSM4426902 WT_capFb_1
Relations
BioProject PRJNA614004
SRA SRP253663

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147357_200313RNA-seq_RPKM_all.xlsx 20.8 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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