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Series GSE147416 Query DataSets for GSE147416
Status Public on Feb 09, 2023
Title An interaction between Gβγ and RNA polymerase II regulates transcription in cardiac fibroblasts
Organism Rattus norvegicus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Gβγ subunits are involved in an array of different signalling processes in various compartments of the cell, including the nucleus. To gain further insight into the functions of nuclear Gβγ, we investigated the functional role of Gβγ signalling in the regulation of GPCR-mediated gene expression in primary rat neonatal cardiac fibroblasts. Here, we demonstrate that following activation of the angiotensin II type I receptor in these cells, Gβγ dimers interact with RNA polymerase II (RNAPII). Our findings suggest that Gβ1 recruitment to RNAPII negatively regulates the fibrotic transcriptional response, which can be overcome by strong fibrotic stimuli. The Gβγ-RNAPII interaction was also investigated in HEK 293 cells and was regulated by signaling pathways that diverged from those operating in cardiac fibroblasts, suggesting that although it may be a conserved feature of transcriptional regulation, such regulation may be cell-specific. Taken together, our studies reveal a novel interaction between Gβγ subunits and RNA polymerase II and expand the role for Gβγ signalling in cardiac fibrosis.
 
Overall design Gβ1 and RNAPII ChIP-seq from neonatal rat cardiac fibroblasts
 
Contributor(s) Khan SM, Martin RD, Gora S, Bouazza C, Jones-Tabah J, Zhang A, MacKinnon S, Trieu P, Clarke PS, Tanny JC, Hébert TE
Citation(s) 36841480
Submission date Mar 23, 2020
Last update date Apr 04, 2023
Contact name Terence Hébert
E-mail(s) terence.hebert@mcgill.ca
Organization name McGill University
Department Pharmacology and Therapeutics
Street address 3655 Promenade Sir William Osler
City Montreal
State/province Quebec
ZIP/Postal code H3G1Y6
Country Canada
 
Platforms (1)
GPL22396 Illumina HiSeq 4000 (Rattus norvegicus)
Samples (17)
GSM4430249 RNAPII_DMEM_siCtrl_1
GSM4430250 RNAPII_DMEM_siCtrl_2
GSM4430251 RNAPII_DMEM_siCtrl_3
Relations
BioProject PRJNA614512
SRA SRP253756

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147416_Flag_G1_AngII.bw 683.7 Mb (ftp)(http) BW
GSE147416_Flag_G1_DMEM.bw 829.4 Mb (ftp)(http) BW
GSE147416_RNAPII_AngII_siCtrl.bw 1020.7 Mb (ftp)(http) BW
GSE147416_RNAPII_AngII_siG_1.bw 1.1 Gb (ftp)(http) BW
GSE147416_RNAPII_DMEM_siCtrl.bw 1.0 Gb (ftp)(http) BW
GSE147416_RNAPII_DMEM_siG_1.bw 1.1 Gb (ftp)(http) BW
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Raw data are available in SRA
Processed data are available on Series record

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