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GEO accession:
Series GSE147899
Query DataSets for GSE147899
Status
Public on Nov 13, 2020
Title
DNMT3A haploinsufficiency results in behavioral deficits and global epigenomic dysregulation shared across neurodevelopment disorders
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
33238114
,
37952155
Submission date
Apr 01, 2020
Last update date
Feb 15, 2024
Contact name
Harrison Wren Gabel
E-mail(s)
gabelh@pcg.wustl.edu
Organization name
Harvard Medical School
Department
Neurbiology
Lab
Michael Greenberg
Street address
220 longwood avenue
City
brookline
State/province
Massachusetts
ZIP/Postal code
02115
Country
USA
Platforms (3)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL21493
Illumina HiSeq 3000 (Mus musculus)
Samples (222)
Less...
More...
GSM4446507
139-3 (RNA-seq)
GSM4446508
048-3 (RNA-seq)
GSM4446509
046-1 (RNA-seq)
GSM4446510
047-2 (RNA-seq)
GSM4446511
046-2 (RNA-seq)
GSM4446512
139-2 (RNA-seq)
GSM4446513
048-2 (RNA-seq)
GSM4446514
047-1 (RNA-seq)
GSM4446515
119-1 (RNA-seq)
GSM4446516
119-2 (RNA-seq)
GSM4446517
141-1 (RNA-seq)
GSM4446518
141-2 (RNA-seq)
GSM4446519
141-3 (RNA-seq)
GSM4446520
141-4 (RNA-seq)
GSM4447392
650-1 (ChIP-seq)
GSM4447393
650-2 (ChIP-seq)
GSM4447394
651-4 (ChIP-seq)
GSM4447395
651-5 (ChIP-seq)
GSM4447396
119-1 (ChIP-seq)
GSM4447397
119-2 (ChIP-seq)
GSM4447398
141-1 (ChIP-seq)
GSM4447399
141-3 (ChIP-seq)
GSM4447400
726 (ChIP-seq)
GSM4447401
728 (ChIP-seq)
GSM4448424
694_hKO (BS-seq)
GSM4448425
695_WT (BS-seq)
GSM4448426
046-1_WT (BS-seq)
GSM4448427
046-2_hKO (BS-seq)
GSM4448428
720_cor (BS-seq)
GSM4448429
721_cor (BS-seq)
GSM4448430
726_cor (BS-seq)
GSM4448431
728_cor (BS-seq)
GSM4448432
1009_cor (BS-seq)
GSM4448433
266-1_cor (BS-seq)
GSM4448434
723_cor (BS-seq)
GSM4448435
724_cor (BS-seq)
GSM4448436
006-2_cor (BS-seq)
GSM4448437
006-5_cor (BS-seq)
GSM4448438
007-2_cor (BS-seq)
GSM4448439
007-3_cor (BS-seq)
GSM4448440
146-6_cor (BS-seq)
GSM4448441
146-8_cor (BS-seq)
GSM4448442
183-3_cor (BS-seq)
GSM4448443
183-4_cor (BS-seq)
GSM4448444
002-1_cor (BS-seq)
GSM4448445
002-4_cor (BS-seq)
GSM4448446
008-3_cor (BS-seq)
GSM4448447
008-4_cor (BS-seq)
GSM4448448
071-1_cor (BS-seq)
GSM4448449
071-3_cor (BS-seq)
GSM4448450
146-7_cor (BS-seq)
GSM4448451
146-9_cor (BS-seq)
GSM4448452
046-1_cb (BS-seq)
GSM4448453
046-1_hip (BS-seq)
GSM4448454
046-1_cor1 (BS-seq)
GSM4448455
046-1_str (BS-seq)
GSM4448456
046-2_cb (BS-seq)
GSM4448457
046-2_hip (BS-seq)
GSM4448458
046-2_cor1 (BS-seq)
GSM4448459
046-2_str (BS-seq)
GSM4448460
001-2_cor (BS-seq)
GSM4448461
001-4_cor (BS-seq)
GSM4448462
006-3_cor (BS-seq)
GSM4448463
006-4_cor (BS-seq)
GSM4448464
047-1_cor1 (BS-seq)
GSM4448465
047-2_cor1 (BS-seq)
GSM4448466
184-1_cor (BS-seq)
GSM4448467
184-2_cor (BS-seq)
GSM4448468
006-2_cb (BS-seq)
GSM4448469
006-5_cb (BS-seq)
GSM4448470
047-1_cb (BS-seq)
GSM4448471
047-1_hip (BS-seq)
GSM4448472
047-1_str (BS-seq)
GSM4448473
047-2_cb (BS-seq)
GSM4448474
047-2_hip (BS-seq)
GSM4448475
047-2_str (BS-seq)
GSM4448476
001-1_cor (BS-seq)
GSM4448477
001-3_cor (BS-seq)
GSM4448478
049-1_cor (BS-seq)
GSM4448479
049-3_cor (BS-seq)
GSM4448480
146-3_cor (BS-seq)
GSM4448481
146-4_cor (BS-seq)
GSM4448482
183-7_cor (BS-seq)
GSM4448483
046-1_cor2 (BS-seq)
GSM4448484
046-2_cor2 (BS-seq)
GSM4448485
306-1_cor1 (BS-seq)
GSM4448486
269-1_cor (BS-seq)
GSM4448487
269-2_cor (BS-seq)
GSM4448488
WT1_cor (BS-seq)
GSM4448489
046-1_cor3 (BS-seq)
GSM4448490
046-2_cor3 (BS-seq)
GSM4448491
694_cor (BS-seq)
GSM4448492
695_cor (BS-seq)
GSM4448493
306-1_cb (BS-seq)
GSM4448494
306-1_cor2 (BS-seq)
GSM4448495
306-1_hip (BS-seq)
GSM4448496
306-1_str (BS-seq)
GSM4448497
306-1_cor3 (BS-seq)
GSM4448498
306-4_cor1 (BS-seq)
GSM4448499
046-1_liv (BS-seq)
GSM4448500
046-2_liv (BS-seq)
GSM4448501
047-1_liv (BS-seq)
GSM4448502
047-2_liv (BS-seq)
GSM4448503
602-2_hip (BS-seq)
GSM4448504
602-2_liv (BS-seq)
GSM4448505
306-1_liv (BS-seq)
GSM4448506
439B_cor (BS-seq)
GSM4448507
439F_cor (BS-seq)
GSM4448508
J029-3_cor (BS-seq)
GSM4448509
047-1_cor2 (BS-seq)
GSM4448510
047-2_cor2 (BS-seq)
GSM4448511
602-2_cor1 (BS-seq)
GSM4448512
306-4_cor2 (BS-seq)
GSM4448513
602-2_cor2 (BS-seq)
GSM4448514
602-2_cb (BS-seq)
GSM4448515
602-2_cor3 (BS-seq)
GSM4448516
602-2_str (BS-seq)
GSM4448517
703-2_cor (BS-seq)
GSM4448518
622-2_cor (BS-seq)
GSM4448519
701-1_cor (BS-seq)
GSM4448520
Gabel21_Cre-B_GTCGTAATCT_S51_L001 (BS-seq)
GSM4448521
Gabel21_NV-C_AACCAGATCT_S44_L001 (BS-seq)
GSM4448522
Gabel21_pYL10-10_5A_AAGCCTATCT_S50_L001 (BS-seq)
GSM4448523
Gabel21_pYL11-3_4A_AGTGAGATCT_S46_L001 (BS-seq)
GSM4448524
Gabel21_pYL5-5_7C_TGGTGAATCT_S45_L001 (BS-seq)
GSM4448525
Gabel21_pYL6-4_8B_GCACTAATCT_S47_L001 (BS-seq)
GSM4448526
Gabel21_pYL9-14_5C_GTGCTTATCT_S49_L001 (BS-seq)
GSM4448527
Gabel21_pYL9-7_3C_ACCTCAATCT_S48_L001 (BS-seq)
GSM4448528
Gabel_33_p11CreB_S130 (BS-seq)
GSM4448529
Gabel_33_p17pYL8-20B_S131 (BS-seq)
GSM4448530
Gabel_33_p1pYL5-5_7C_S124 (BS-seq)
GSM4448531
Gabel_33_p3pYL6-25_9B_S125 (BS-seq)
GSM4448532
Gabel_33_p5pYL7-11_1B_S126 (BS-seq)
GSM4448533
Gabel_33_p7pYL9-14_3C_S127 (BS-seq)
GSM4448534
Gabel_33_p9pYL10-32_2B_S128 (BS-seq)
GSM4448535
Gabel_Cre-A_S02279_S8 (BS-seq)
GSM4448536
Gabel_CreA_S17 (BS-seq)
GSM4448537
Gabel_NV-A_S02272_S1 (BS-seq)
GSM4448538
Gabel_Nva_S16 (BS-seq)
GSM4448539
Gabel_p13pYL14-37_9B_S25 (BS-seq)
GSM4448540
Gabel_p13-pYL15-29-9A_S321 (BS-seq)
GSM4448541
Gabel_p15-pYL15-29-9_S322 (BS-seq)
GSM4448542
Gabel_p15-pYL5-7-2C_S316 (BS-seq)
GSM4448543
Gabel_p17pYL8-20A_S20 (BS-seq)
GSM4448544
p1-Cre-A_ACCTCAATCTCGT_S126 (BS-seq)
GSM4448545
Gabel_p1-Cre-B_S315 (BS-seq)
GSM4448546
p1-Cre-B_SIC_index_1577_TGCATGTAGATCT_S130 (BS-seq)
GSM4448547
p1-NV_GCACTAATCTCGT_S125 (BS-seq)
GSM4448548
p1pYL5-7_2A_GTGCTTATCTCGT_S127 (BS-seq)
GSM4448549
p1pYL5-7_2C_SIC_index_1578_TCGCGAGGGATCT_S131 (BS-seq)
GSM4448550
p3-NV_SIC_index_1576_CTCAGGGCCATCT_S135 (BS-seq)
GSM4448551
Gabel_p3pYL6-25_9C_S18 (BS-seq)
GSM4448552
p3pYL8-16B_AAGCCTATCTCGT_S128 (BS-seq)
GSM4448553
p3pYL8-20A_SIC_index_1579_CTTCCCATGATCT_S132 (BS-seq)
GSM4448554
Gabel_p5pYL7-11_1C_S19 (BS-seq)
GSM4448555
Gabel_p5-pYL8-16C_S317 (BS-seq)
GSM4448556
Gabel_p5-pYL8-20C_S318 (BS-seq)
GSM4448557
Gabel_p7pYL9-14_3B_S21 (BS-seq)
GSM4448558
Gabel_p9pYL11-48_8B_S22 (BS-seq)
GSM4448559
Gabel_p9pYL11-48_8C_S23 (BS-seq)
GSM4448560
Gabel_pYL10-10_5C_S02278_S7 (BS-seq)
GSM4448561
Gabel_pYL10-32_2A_S18 (BS-seq)
GSM4448562
Gabel_pYL5-5_7A_S02273_S2 (BS-seq)
GSM4448563
Gabel_pYL5-5_7A_S15 (BS-seq)
GSM4448564
Gabel_pYL5-5_7B_S02274_S3 (BS-seq)
GSM4448565
Gabel_pYL6-2_4B_S02275_S4 (BS-seq)
GSM4448566
Gabel_pYL9-14_5A_S02277_S6 (BS-seq)
GSM4448567
Gabel_Cre_A_S19 (BS-seq)
GSM4448568
Gabel_NV_A_12_S21 (BS-seq)
GSM4448569
Gabel_NV_A_S14 (BS-seq)
GSM4448570
Gabel_p11-CreA_S39 (BS-seq)
GSM4448571
Gabel_p13-NVd_S38 (BS-seq)
GSM4448572
Gabel_p13pYL14_37_9A_S44 (BS-seq)
GSM4448573
Gabel_p13pYL15-20-9A_S14 (BS-seq)
GSM4448574
p13pYL15-29-9B_AACCAGATCT_S19 (BS-seq)
GSM4448575
Gabel_p15-CreA_S15 (BS-seq)
GSM4448576
Gabel_p15-NoVirusA_S16 (BS-seq)
GSM4448577
Gabel_p15pYL15-20-9_S58 (BS-seq)
GSM4448578
Gabel_p15pYL5-7-2A (BS-seq)
GSM4448579
Gabel_p1-Cre-A (BS-seq)
GSM4448580
Gabel_p1-NV-A (BS-seq)
GSM4448581
Gabel_p1pYL5-5_7B_S40 (BS-seq)
GSM4448582
Gabel_p1pYL5-7-2A_S11 (BS-seq)
GSM4448583
Gabel_p1pYL5-7_2C_L001 (BS-seq)
GSM4448584
Gabel_p1pYL5-7-7B_S51 (BS-seq)
GSM4448585
Gabel_p3pYL6-25_9A_S41 (BS-seq)
GSM4448586
Gabel_p3pYL6-25-9BB (BS-seq)
GSM4448587
Gabel_p3pYL6-25-9C_S52 (BS-seq)
GSM4448588
Gabel_p3pYL7-9-2A_S12 (BS-seq)
GSM4448589
Gabel_p3pYL7-9-2B (BS-seq)
GSM4448590
Gabel_p3pYL7-9-2C_S53 (BS-seq)
GSM4448591
Gabel_p3pYL8-16A_L001 (BS-seq)
GSM4448592
Gabel_p3pYL8-16C_L001 (BS-seq)
GSM4448593
Gabel_p3pYL8-20B_L001 (BS-seq)
GSM4448594
Gabel_p5pYL8-20B_S54 (BS-seq)
GSM4448595
Gabel_p5pYL9-14-3B (BS-seq)
GSM4448596
Gabel_p5pYL9-14-3C_S55 (BS-seq)
GSM4448597
p7pYL10-23-2B_GCACTAATCT_S22 (BS-seq)
GSM4448598
Gabel_p7pYL10-23-2_S56 (BS-seq)
GSM4448599
Gabel_p7pYL11-41A_S13 (BS-seq)
GSM4448600
Gabel_p7pYL11-41B_AGTGAGATCT_S21 (BS-seq)
GSM4448601
Gabel_p7pYL11-41B_S57 (BS-seq)
GSM4448602
Gabel_p7pYL8-16A_L001 (BS-seq)
GSM4448603
Gabel_p7pYL9-14_3A_S42 (BS-seq)
GSM4448604
Gabel_p9pYL11_48_8A_S43 (BS-seq)
GSM4448605
p9pYL14-27-9B_TGGTGAATCT_S20 (BS-seq)
GSM4448606
Gabel_pYL14_13_7B_S16 (BS-seq)
GSM4448607
Gabel_pYL5_NV_C_12_S20 (BS-seq)
GSM4448608
Gabel_pYL7_14A_S17 (BS-seq)
GSM4448609
Gabel_pYL7_14C_S18 (BS-seq)
GSM4448610
DIV10A (BS-seq)
GSM4448611
DIV10B (BS-seq)
GSM4448612
DIV12-5B (BS-seq)
GSM4448613
DIV12_5A (BS-seq)
GSM4448614
DIV4A (BS-seq)
GSM4448615
DIV4B (BS-seq)
GSM4448616
DIV7A (BS-seq)
GSM4448617
DIV7B (BS-seq)
GSM4794076
651-2_hKO (BS-seq)
GSM4794078
651-3_WT (BS-seq)
GSM4794079
047-1_hKO (BS-seq)
GSM4794081
047-2_WT (BS-seq)
This SuperSeries is composed of the following SubSeries:
GSE147818
DNMT3A haploinsufficiency results in behavioral deficits and global epigenomic dysregulation shared across neurodevelopment disorders [RNA-Seq]
GSE147867
DNMT3A haploinsufficiency results in behavioral deficits and global epigenomic dysregulation shared across neurodevelopment disorders [ChIP-seq]
GSE147898
DNMT3A haploinsufficiency results in behavioral deficits and global epigenomic dysregulation shared across neurodevelopment disorders [Bisulfite-Seq]
Relations
BioProject
PRJNA622496
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