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Series GSE148489 Query DataSets for GSE148489
Status Public on Apr 03, 2023
Title Gene expression analysis after shRNA-mediated knockdown of lncRNA CRNDE in the APL cell line NB4
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We performed RNA sequencing to identify differentially expressed genes and associated functional pathways.
 
Overall design RNA sequencing was performed in NB4 cells infected with the CRNDE shRNA (sh-CRNDE) or the non-targeting control shRNA (sh-Control). NB4 cells were harvested at day three post-infection, and total RNA was extracted.
 
Contributor(s) Ma X, Zhao M, Wang K
Citation(s) 33298855
Submission date Apr 10, 2020
Last update date Apr 04, 2023
Contact name Xuefei Ma
E-mail(s) maxuefei1990@sina.com
Phone +86 18516746081
Organization name Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine
Department State Key Laboratory of Medical Genomics and Shanghai Institute of Hematology
Street address 197 Ruijin Road II
City Shanghai
State/province Shanghai
ZIP/Postal code 200025
Country China
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (2)
GSM4472452 NB4_sh-CRNDE
GSM4472453 NB4_sh-Control
Relations
BioProject PRJNA624645
SRA SRP256215

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE148489_RAW.tar 330.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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