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Series GSE148643 Query DataSets for GSE148643
Status Public on Oct 01, 2020
Title Profibrotic regulation of FGFR3 signaling in fibroblasts
Organism Mus musculus
Experiment type Expression profiling by array
Summary We employed dermal fibroblasts isolated from Fgfr3G374Rneo+ mice, which do not express functional Fgfr3 (Fgfr3KO), from Fgfr3G374Rneo- mice with ligand-independent constitutive activation of Fgfr3 (Fgfr3Act) and from wildtype (WT) mice with normal expression of Fgfr3. Total RNA from these murine dermal fibroblasts (passage 4) were extracted and after quality control, were hybridized to the murine genome U74 gene chip. We have identified that Fgfr3 regulates important profibrotic pathways in fibroblasts. Selective upregulation of fibroblast growth factor receptor 3 (FGFR3) and its ligand FGF9 promote fibroblast activation and tissue fibrosis Transcriptome profiling, in silico analysis and functional experiments revealed that FGFR3 synergistically induces multiple profibrotic pathways including Endothelin-, Interleukin-4- and CTGF-signaling in a CREB-dependent manner. Inhibition of FGFR3 signaling by fibroblast-specific knockout of FGFR3 or FGF9 or pharmacological inhibition of FGFR3 inhibited fibroblast activation and attenuated experimental skin fibrosis. We have characterized FGFR3 as an upstream regulator of a network of profibrotic mediators and as a potential target for the treatment of fibrosis.
 
Overall design We used microarrays to detail the global program of gene expression in fibroblasts.
Three conditions, constitutive activation of Fgfr3 and Fgfr3 knockout with wildtype control (n=3 for all groups).
 
Contributor(s) Chakraborty D, Zhu H, Distler J
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Submission date Apr 14, 2020
Last update date Oct 03, 2020
Contact name Debomita Chakraborty
E-mail(s) Debomita.Chakraborty@uk-erlangen.de
Organization name Friedrich-Alexander-University (FAU) Erlangen-Nürnberg and Universitätsklinikum Erlangen
Street address Ulmenweg 18
City Erlangen
ZIP/Postal code 91054
Country Germany
 
Platforms (1)
GPL81 [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array
Samples (3)
GSM4476070 FGFR3Act
GSM4476071 FGFR3KO
GSM4476072 FGFR3WT
Relations
BioProject PRJNA625273

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Supplementary file Size Download File type/resource
GSE148643_RAW.tar 8.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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