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Series GSE149013 Query DataSets for GSE149013
Status Public on Apr 22, 2020
Title Transcriptomic analysis of stress response to novel antimicrobial coatings in a clinical MRSA strain
Organism Staphylococcus aureus
Experiment type Expression profiling by high throughput sequencing
Summary Effect of two different antimicrobial materials, functionalized graphene oxide (GOX), and AGXX® coated on cellulose fibers, on the growth and transcriptome of the clinical MRSA strain S. aureus 04-02981. In addition, we investigated the effect of a third material as a combination of GOX and AGXX® fibers on S. aureus 04-02981
 
Overall design 26 samples; 5 samples and 5 time points; no replicates
 
Contributor(s) Vaishampayan A, Ahmed R, Wagner O, de Jong A, Haag R, Kok J, Grohmann E
Citation(s) 33321624
Submission date Apr 21, 2020
Last update date Aug 03, 2021
Contact name Anne de Jong
E-mail(s) anne.de.jong@rug.nl
Phone +31 50 363 2047
Organization name university of Groningen
Department Molecular Genetics
Street address Nijenborgh 7
City Groningen
ZIP/Postal code 9747 AG
Country Netherlands
 
Platforms (1)
GPL27158 Illumina NovaSeq 6000 (Staphylococcus aureus)
Samples (25)
GSM4487414 AGXX0
GSM4487415 AGXX120
GSM4487416 AGXX180
Relations
BioProject PRJNA627131
SRA SRP257698

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149013_RAW.tar 1.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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