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| Status |
Public on May 31, 2021 |
| Title |
RNA-seq analysis of Mycobacterium Smegmatis ΔF6 vs. Wild type |
| Organism |
Mycolicibacterium smegmatis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The study was conducted to understand the role of F6 small non-coding RNA in M.smegmatis. The results are a description of transcriptome changes in M. smegmaits strain with deletion of a gene of small RNA F6 relative to wild type strain.
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| |
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| Overall design |
Trancriprtome profiles of wild type and ΔF6 strains of M.smegmatis in logarithmic phase were generated by deep sequencing, in triplicate, using IlluminaHiSeq2500
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| |
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| Contributor(s) |
Grigorov A, Salina EG, Bychenko O, Skvortsova Y, Azhikina T |
| Citation(s) |
34768965 |
| |
| Submission date |
Apr 23, 2020 |
| Last update date |
Feb 08, 2022 |
| Contact name |
Artem Grigorov |
| E-mail(s) |
artgrigorov@gmail.com
|
| Organization name |
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry
|
| Department |
Genomics and Postgenomic Technologies
|
| Lab |
Regulatory Transcriptomics
|
| Street address |
Ulitsa Miklukho-Maklaya, 16/10
|
| City |
Moscow |
| ZIP/Postal code |
117997 |
| Country |
Russia |
| |
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| Platforms (1) |
| GPL26210 |
Illumina HiSeq 2500 (Mycolicibacterium smegmatis) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA627603 |
| SRA |
SRP258032 |
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