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Series GSE149474 Query DataSets for GSE149474
Status Public on Mar 31, 2023
Title LINE-1 retrotransposition impacts the genome of human pre-implantation embryos and extraembryonic tissues [somatic tissues]
Organism Homo sapiens
Experiment type Genome variation profiling by high throughput sequencing
Summary We did not detected de novo endogenous LINE-1 insertions in human somatic tissues
 
Overall design We searched for de novo LINE-1 insertions by RC-seq in pairs of human muscle-bain tissues
 
Contributor(s) Muñoz-Lopez M, Garcia-Perez JL
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Submission date Apr 27, 2020
Last update date Mar 31, 2023
Contact name Martin Munoz-Lopez
E-mail(s) martin.munoz.science@gmail.com
Organization name GENYO
Street address C/ Ilustración
City Granada
State/province GRANADA
ZIP/Postal code 18016
Country Spain
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (4)
GSM4502820 Individual_23710_brain
GSM4502821 Individual_23710_muscle
GSM4502822 Individual_24154_brain
This SubSeries is part of SuperSeries:
GSE149477 LINE-1 retrotransposition impacts the genome of human pre-implantation embryos and extraembryonic tissues
Relations
BioProject PRJNA628729
SRA SRP258761

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149474_SOMATIC_TISSUES_PROCESSED_DATA.xlsx 34.4 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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