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Series GSE14999 Query DataSets for GSE14999
Status Public on May 06, 2009
Title Gene expression profiling of human and dog breast cancers
Organisms Homo sapiens; Canis lupus familiaris
Experiment type Expression profiling by array
Summary Spontaneous tumors in dog have been demonstrated to share many features with their human counterparts, including relevant molecular targets, histological appearance, genetics, biological behavior and response to conventional treatments. Mammary tumors in dog therefore provide an attractive alternative to more classical mouse models, such as transgenics or xenografts, where the tumour is artificially induced. To assess the extent to which dog tumors represent clinically significant human phenotypes, we performed the first genome-wide comparative analysis of transcriptional changes occurring in mammary tumors of the two species, with particular focus on the molecular pathways involved.

Keywords: Expression profiling by array
 
Overall design 26 breast tumors and 7 normal mammary glands from dogs. Each sample was hybridized in duplicate with fluor reversal to systematically correct for dye bias. 68 infiltrating ductal mammary carcinoma and 61 adjacent non-involved tissues from humans. Each sample was hybridized in duplicate with fluor reversal to systematically correct for dye bias.
 
Contributor(s) Uva P, de Rinaldis E
Citation(s) 19327144
Submission date Feb 25, 2009
Last update date Nov 05, 2014
Contact name Paolo Uva
Organization name IRCCS Istituto Giannina Gaslini
Lab Clinical Bioinformatics
Street address Via Gerolamo Gaslini, 5
City Genoa
ZIP/Postal code 16147
Country Italy
 
Platforms (2)
GPL3991 Human 3.0 A1
GPL7198 Rosetta/Merck Dog 44k 1.0 microarray
Samples (162)
GSM374620 Dog Normal mammary gland 1
GSM374621 Dog Normal mammary gland 2
GSM374622 Dog Normal mammary gland 3
Relations
BioProject PRJNA111853

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
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Supplementary data files not provided
Processed data included within Sample table

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