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Series GSE150141 Query DataSets for GSE150141
Status Public on Jul 31, 2020
Title Transcriptome profiling of Clostridium tetani
Organism Clostridium tetani
Experiment type Expression profiling by high throughput sequencing
Summary Clostridium tetani produces the tetanus-causing tetanus toxin (TeNT), one of the most powerful bacterial toxins known to humankind. The regulation of toxin expression is complex and involves the alternative sigma factor TetR as well as other regulators. Here, we identified a novel regulatory molecule, a non-coding small regulatory RNA (sRNA), located in the 3’ untranslated region of the tent gene. We show with an antisense RNA approach and recombinant expression of the tent locus with and without the sRNA in C. tetani strains that the sRNA acts as a negative regulator of TeNT expression and modulates the growth pattern of C. tetani. Its possible role is to limit tetanus toxin levels in the exponential growth phase; thus, it might interlock bacterial growth and toxin production.
 
Overall design Transcriptome of Clostridium tetani in two different media and two different growth phases
 
Contributor(s) Popoff MR, Brueggemann H
Citation(s) 33603121
Submission date May 08, 2020
Last update date Mar 02, 2021
Contact name Holger Brueggemann
E-mail(s) brueggemann@biomed.au.dk
Organization name Aarhus University
Department Biomedicine
Street address Høegh-Guldbergs Gade 10
City Aarhus
ZIP/Postal code 8000
Country Denmark
 
Platforms (1)
GPL28508 Illumina HiSeq 2000 (Clostridium tetani)
Samples (4)
GSM4524180 TGY-24h
GSM4524181 TGY-48h
GSM4524182 Max-Soy-24h
Relations
BioProject PRJNA631247
SRA SRP260809

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE150141_RAW.tar 1.1 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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