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| Status |
Public on Mar 16, 2021 |
| Title |
Single cell RNA sequencing of large and small airway surface epithelium in newborn cystic fibrosis (CF) and non-CF pigs |
| Organism |
Sus scrofa |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
The goal of this study was to compare cell composition and gene expression patterns for different cell types in large and small airways of CFTR+/+ (non-CF) and CFTR-/- (CF) pigs.
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| Overall design |
Tissue samples from trachea and small airways (< 2 mm) were collected from newborn pigs, prepared for single cell sequencing via 10X Genomics Chromium controller, and sequenced on Illumina HiSeq4000
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| Contributor(s) |
Pezzulo AA, Thurman AL, Yu W, Zabner J, Welsh MJ |
| Citation(s) |
33970215, 36108628 |
| |
| Submission date |
May 10, 2020 |
| Last update date |
Jan 06, 2023 |
| Contact name |
Alejandro A. Pezzulo |
| E-mail(s) |
alejandro-pezzulo@uiowa.edu
|
| Organization name |
Universty of Iowa
|
| Department |
Department of Internal Medicine
|
| Lab |
Pezzulo Lab
|
| Street address |
6316 Pappajohn Biomedical Discovery Building
|
| City |
Iowa City |
| State/province |
Iowa |
| ZIP/Postal code |
52242 |
| Country |
USA |
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| Platforms (1) |
| GPL22475 |
Illumina HiSeq 4000 (Sus scrofa) |
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| Samples (19)
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| Relations |
| BioProject |
PRJNA631526 |
| SRA |
SRP261147 |
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