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Series GSE151132 Query DataSets for GSE151132
Status Public on Apr 14, 2021
Title ChIP-seq analysis of MED1 and FOSL1 in SCC1 cells after depletion of FOSL1
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To explore genome-wide alteration MED1 and FOSL1 after depletion of FOSL1, we performed chromatin immunoprecipitation sequencing (ChIP-seq) of SCC1 cells to examine genome-wide recruitment of MED1 and FOSL1 following FOSL1 knockdown. Depletion of FOSL1 led to dramatically loss of the recruitment of MED1 and FOSL1 at a cohort of key oncogenes associate with tumorigenesis and metastasis.
 
Overall design Examination of ChIP-seq of HNSCC cells treated with FOSL1 siRNA.
 
Contributor(s) Li J
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Submission date May 25, 2020
Last update date Apr 17, 2021
Contact name Jiong Li
E-mail(s) jli29@vcu.edu
Phone 3105617186
Organization name VCU
Street address 800 E Leigh Street, suite 212
City Richmond
State/province Virginia
ZIP/Postal code 23298
Country USA
 
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (4)
GSM4567094 MED1 control-siRNA
GSM4567095 MED1 FOSL1-siRNA
GSM4567096 FOSL1 control-siRNA
Relations
BioProject PRJNA634845
SRA SRP263455

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE151132_RAW.tar 612.2 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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