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Series GSE151662 Query DataSets for GSE151662
Status Public on Jun 03, 2020
Title Transcriptomic expression profiles of SPF chicken-spleen infected with duck-origin H7N9 subtype avian influenza virus and fowl adenovirus-4
Organism Gallus gallus
Experiment type Expression profiling by high throughput sequencing
Summary With the purpose to elucidate the expression changes of host genes of SPF chickens infected with duck-origin H7N9 subtype avian influenza virus at 24 hours post-infection(hpi) and fowl adenovirus-4 at 48 dpi. The spleens of SPF chickens infected with duck-origin H7N9 subtype avian influenza virus and fowl adenovirus-4 were collected and high throughout sequenced. Compared with the control group, there were 2426 differentially expressed genes were obtained in the duck-origin H7N9 subtype avian influenza virus group, including 913 up-regulated genes and 1513 down-regulated genes, and there were 1534 differentially expressed genes were obtained in the fowl adenovirus-4 group, including 632 up-regulated genes and 902 down-regulated genes.
 
Overall design Spleen mRNA profiles of SPF chickens infected with duck-origin H7N9 AIV at 24 hpi and with Fowl adenovirus-4 at 48 hpi and control were generated by deep sequencing, in triplicate, using Illumina X ten.
 
Contributor(s) Shi S
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Submission date Jun 02, 2020
Last update date Jun 03, 2020
Contact name Shaohua Shi
E-mail(s) shaohua115@163.com
Organization name Yangzhou University
Department College of Veterinary Medicine
Street address 48 East Wenhui Road
City Yangzhou
State/province Jiangsu
ZIP/Postal code 225009
Country China
 
Platforms (1)
GPL24517 HiSeq X Ten (Gallus gallus)
Samples (9)
GSM4587817 duizhao-pi-1
GSM4587818 duizhao-pi-2
GSM4587819 duizhao-pi-3
Relations
BioProject PRJNA636789
SRA SRP265641

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE151662_1014gene_expression.txt.gz 2.2 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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