|
Status |
Public on Jun 03, 2020 |
Title |
Transcriptomic expression profiles of SPF chicken-spleen infected with duck-origin H7N9 subtype avian influenza virus and fowl adenovirus-4 |
Organism |
Gallus gallus |
Experiment type |
Expression profiling by high throughput sequencing
|
Summary |
With the purpose to elucidate the expression changes of host genes of SPF chickens infected with duck-origin H7N9 subtype avian influenza virus at 24 hours post-infection(hpi) and fowl adenovirus-4 at 48 dpi. The spleens of SPF chickens infected with duck-origin H7N9 subtype avian influenza virus and fowl adenovirus-4 were collected and high throughout sequenced. Compared with the control group, there were 2426 differentially expressed genes were obtained in the duck-origin H7N9 subtype avian influenza virus group, including 913 up-regulated genes and 1513 down-regulated genes, and there were 1534 differentially expressed genes were obtained in the fowl adenovirus-4 group, including 632 up-regulated genes and 902 down-regulated genes.
|
|
|
Overall design |
Spleen mRNA profiles of SPF chickens infected with duck-origin H7N9 AIV at 24 hpi and with Fowl adenovirus-4 at 48 hpi and control were generated by deep sequencing, in triplicate, using Illumina X ten.
|
|
|
Contributor(s) |
Shi S |
Citation missing |
Has this study been published? Please login to update or notify GEO. |
|
Submission date |
Jun 02, 2020 |
Last update date |
Jun 03, 2020 |
Contact name |
Shaohua Shi |
E-mail(s) |
shaohua115@163.com
|
Organization name |
Yangzhou University
|
Department |
College of Veterinary Medicine
|
Street address |
48 East Wenhui Road
|
City |
Yangzhou |
State/province |
Jiangsu |
ZIP/Postal code |
225009 |
Country |
China |
|
|
Platforms (1) |
|
Samples (9)
|
|
Relations |
BioProject |
PRJNA636789 |
SRA |
SRP265641 |