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Series GSE151884 Query DataSets for GSE151884
Status Public on Jul 02, 2021
Title AC2P20 selectively kills M. tuberculosis at acidic pH by depleting free thiols
Organism Mycobacterium tuberculosis CDC1551
Experiment type Expression profiling by high throughput sequencing
Summary In this study, AC2P20 was prioritized for continued study to test the hypothesis that it was targeting Mtb pathways associated with pH-driven adaptation. RNAseq transcriptional profiling studies showed AC2P20 modulates expression of genes associated with redox-homeostasis. Gene enrichment analysis revealed that the AC2P20 transcriptional profile had significant overlap with a previously characterized pH-selective inhibitor, AC2P36. Like AC2P36, we show that AC2P20 kills Mtb by selectively depleting free thiols at acidic pH. Mass spectrometry studies show the formation of a disulfide bond between AC2P20 and reduced glutathione, supporting a mechanism where AC2P20 is able to deplete intracellular thiols and dysregulate redox homeostasis.
 
Overall design Examination of M. tuberculosis treated with 20 uM AC2P20 for 24h hours at pH 5.7 as compared to a DSMO control
 
Contributor(s) Dechow SJ, Coulson GB, Wilson MW, Larsen SD, Abramovitch RB
Citation(s) 34168865
Submission date Jun 05, 2020
Last update date Jul 02, 2021
Contact name Robert B. Abramovitch
Organization name Michigan State University
Department Microbiology and Molecular Genetics
Street address 567 Wilson Road
City East Lansing
State/province MI
ZIP/Postal code 48824
Country USA
 
Platforms (1)
GPL20114 Illumina HiSeq 2500 (Mycobacterium tuberculosis CDC1551)
Samples (4)
GSM4592681 DMSO_1: WT treated with DMSO, pH 5.7 rep 1
GSM4592682 DMSO_2: WT treated with DMSO, pH 5.7 rep 2
GSM4592683 AC2P20_1: WT treated with AC2P20, pH 5.7 rep 1
Relations
BioProject PRJNA637583
SRA SRP266131

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE151884_Supplementary_Tables.xlsx 784.4 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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