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Series GSE151956 Query DataSets for GSE151956
Status Public on Jun 08, 2020
Title RNA-seq analysis of mouse retinas from animals treated with 140mg/kg/day Vigabatrin
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study was to look at the effects of the anti epeleptic drug Vigabatrin on retinal transcripts.
Vigabatrin altered transcripts related to phototransduction, neuronal function and synaptic plasticity.
This is the first study showing that vigabatrin has an effect on the retinal transcriptome
 
Overall design Methods: C57/Bl6 (Week 10-12) Mice were treated with Vigabatrin via subcutaneous osmotic pump for 11 days. At DOL 11, mice were sacrificed and retinas were extracted, flash frozen and stored at -80 prior to RNA extraction.
[contributor] Novogene Inc.
 
Contributor(s) Walters D, Gibson M, Roullet J
Citation(s) 32679486
Submission date Jun 07, 2020
Last update date Sep 07, 2020
Contact name Mike Gibson
E-mail(s) mike.gibson@wsu.edu
Phone 5093686602
Organization name Washington State University
Department Pharmacotherapy
Street address 412 E Spokane Falls Blvd
City Spokane
State/province Washington
ZIP/Postal code 99202
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (10)
GSM4594281 Retina-Untreated, 1580
GSM4594282 Retina-Untreated, 1582
GSM4594283 Retina-Untreated, 2345
Relations
BioProject PRJNA637887
SRA SRP266313

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE151956_Table_1_Eye_Amino_Acids_11.20.18.docx.gz 13.8 Kb (ftp)(http) DOCX
GSE151956_VGB_140vsPBS_DEG_all.fa.gz 127.5 Kb (ftp)(http) FA
GSE151956_readcount_genename_VGB140.txt.gz 1.5 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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