GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE152242
Query DataSets for GSE152242
Status
Public on Oct 22, 2020
Title
Persistent STAT5 activation reprograms the epigenetic landscape in CD4+ T cells to drive polyfunctionality and antitumor immunity
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
33127608
Submission date
Jun 10, 2020
Last update date
Feb 04, 2021
Contact name
Huidong Shi
E-mail(s)
hshi@augusta.edu
Phone
706-721-6000
Organization name
Augusta University
Department
Georgia Cancer Center
Lab
2125 K
Street address
1120 15th Street, CN2138
City
Augusta
State/province
GA
ZIP/Postal code
30912
Country
USA
Platforms (2)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL21493
Illumina HiSeq 3000 (Mus musculus)
Samples (20)
Less...
More...
GSM4609795
Control spleen CD4+ T cells RNA-seq 1
GSM4609796
Control spleen CD4+ T cells RNA-seq 2
GSM4609797
Control spleen CD4+ T cells RNA-seq 3
GSM4609798
CASTAT5 spleen CD4+ T cells RNA-seq 1
GSM4609799
CASTAT5 spleen CD4+ T cells RNA-seq 2
GSM4609800
CASTAT5 spleen CD4+ T cells RNA-seq 3
GSM4609801
Control spleen CD4+ T cells scRNAseq
GSM4609802
CASTAT5 spleen CD4+ T cells scRNAseq
GSM4609808
Control spleen CD4+ T cells ATAC-seq 1
GSM4609809
Control spleen CD4+ T cells ATAC-seq 2
GSM4609810
Control spleen CD4+ T cells ATAC-seq 3
GSM4609811
CASTAT5 spleen CD4+ T cells ATAC-seq 1
GSM4609812
CASTAT5 spleen CD4+ T cells ATAC-seq 2
GSM4609813
CASTAT5 spleen CD4+ T cells ATAC-seq 3
GSM4609814
Control in vitro CD4+ T cells ATAC-seq
GSM4609815
CASTAT5 in vitor CD4+ T cells ATAC-seq
GSM4609816
Control spleen CD4+ T cells ATAC-seq
GSM4609817
CASTAT5 spleen CD4+ T cells ATAC-seq
GSM4609818
Control tumor CD4+ T cells ATAC-seq
GSM4609819
CASTAT5 tumor CD4+ T cells ATAC-seq
This SuperSeries is composed of the following SubSeries:
GSE152237
Persistent STAT5 activation reprograms the epigenetic landscape in CD4+ T cells to drive polyfunctionality and antitumor immunity [RNA-Seq]
GSE152238
Persistent STAT5 activation reprograms the epigenetic landscape in CD4+ T cells to drive polyfunctionality and antitumor immunity [scRNA-Seq]
GSE152240
Persistent STAT5 activation reprograms the epigenetic landscape in CD4+ T cells to drive polyfunctionality and antitumor immunity [ATAC-Seq]
Relations
BioProject
PRJNA638673
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE152242_RAW.tar
2.3 Gb
(http)
(custom)
TAR (of BIGWIG, TXT)
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
Less...
More...