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Series GSE152947 Query DataSets for GSE152947
Status Public on Mar 20, 2023
Title Genome-wide circRNA profiling reveals that circGAS2-2 are abundantly expressed and regulates myoblast proliferation in indigenous Chinese duck breed
Organism Anas platyrhynchos
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary The objective of this study was to identify candidate circular RNAs associated with duck muscle development. circRNA sequencing analysis was employed using female breast muscle samples embryo stage 13th day (E13) and embryo stage 19th day (E19). RNA-seq data and validation experiment in duck myoblast cells showed that circGAS2-2 significantly differential expressed between E13 and E19 group.
 
Overall design Examination of circRNA profiles in female muscle samples from embryo stage 13th day (E13) and embryo stage 19th day (E19).
 
Contributor(s) Chen B, Liu S
Citation(s) 36851380
Submission date Jun 22, 2020
Last update date Mar 20, 2023
Contact name Biao Chen
E-mail(s) chenbiao@jxau.edu.cn
Phone 18931507508
Organization name Jiangxi Agricultural University
Street address Zhimin street, Jingkai district
City Nanchang
ZIP/Postal code 330045
Country China
 
Platforms (1)
GPL28726 Illumina HiSeq 4000 (Anas platyrhynchos)
Samples (6)
GSM4630132 E131
GSM4630133 E132
GSM4630134 E133
Relations
BioProject PRJNA641036
SRA SRP268274

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE152947_1_E19VSE13_circRNA_differential_expression.xlsx 3.8 Mb (ftp)(http) XLSX
GSE152947_1_circRNA_expression.xlsx 3.1 Mb (ftp)(http) XLSX
GSE152947_2_circRNA_backsplice_reads.xlsx 953.0 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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