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| Status |
Public on Jun 09, 2024 |
| Title |
Novel O-GlcNAcylation on Thr71 of histone H4 preferentially localizes to active gene regions |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
We report genome-wide distribution of newly discovered O-GlcNAcylated H4 at threonine 71 (H4T71Gc) in mouse embryonic stem cells (mESCs, J1 line) cultured in 25 mM glucose (mESCs-25mMG) or 1 mM glucose (mESCs-1mMG) condition, human embryonic stem cells (hESCs, H9) and human induced-pluripotent stem cells (hiPSCs, 201B7). We found that H4T71Gc preferentially localize to gene regions, especially those with relatively high expression levels. Interestingly, the localized gene region of H4T71Gc changes in response to changes in extracellular glucose concentration. This study using ChIP-seq analysis provides genomic distribution of novel histone O-GlcNAcylation in mouse and human pluripotent stem cells.
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| Overall design |
ChIP-seq analysis of H4T71Gc in mESCs, hESCs and hiPSCs.
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| Contributor(s) |
Nara D, Matsumoto S, Hayakawa K |
| Citation missing |
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| |
| Submission date |
Jun 22, 2020 |
| Last update date |
Jun 09, 2024 |
| Contact name |
Daisuke Nara |
| Organization name |
The uniersity of Tokyo
|
| Department |
Dep. of Animal resource sciences
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| Lab |
Lab. of cellular biochemistry
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| Street address |
1-1-1 Yayoi
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| City |
Bunkyo-ku |
| State/province |
Tokyo |
| ZIP/Postal code |
1138657 |
| Country |
Japan |
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| Platforms (2) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA641158 |
| SRA |
SRP268348 |
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