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Series GSE154096 Query DataSets for GSE154096
Status Public on Oct 01, 2021
Title Isogenic human pluripotent stem cell disease models reveal actin binding Rho activating protein deficiency underlies the cardiac troponin T DK210 mutation-induced familial dilated cardiomyopathy I
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The cTnT-DK210 DCM mice showed ABRA protein deficiency, sarcomeric disruption, and compromised heart contractility. Heart-specific expression of ABRA in cTnT-DK210 mice restored sarcomeric structures, reversed the disease progress, and rescued the DCM phenotypes. ABRA deficiency and compromised downstream serum response factor-regulated muscle gene expression play a key role in familial DCM caused by the cTnT-DK210 mutation. ABRA is a good therapeutic gene for cTnT-DK210-induced DCM and could be translated to other cTnT mutations-induced familial DCM.
 
Overall design Whole transcriptomic analyses of wild type, control AAV9-Luciferase and AAV9-ABRA treated cTnT-DK210 mice hearts.
 
Contributor(s) Sun N, Li B, Zhan Y, Liang Q
Citation(s) 33884582
Submission date Jul 09, 2020
Last update date Feb 08, 2022
Contact name Bin Li
E-mail(s) 14111010069@fudan.edu.cn
Organization name Fudan University
Department Department of Physiology and Pathophysiology
Street address Dong'an Road
City Shanghai
ZIP/Postal code 200032
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (9)
GSM4663855 WT-rep1
GSM4663856 WT-rep2
GSM4663857 WT-rep3
Relations
BioProject PRJNA645125
SRA SRP271103

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE154096_Gene_counts_matrix_mouse.txt.gz 1.7 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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