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Series GSE154522 Query DataSets for GSE154522
Status Public on Apr 19, 2021
Title NusG is an intrinsic transcription termination factor that stimulates motility and cooperatively coordinates global gene expression with NusA
Organism Bacillus subtilis
Experiment type Expression profiling by high throughput sequencing
Summary In this work we conducted Term-seq on Wild Type, NusA depletion, nusG deletion, and NusA depletion nusG deletion strains of B. subtilis. Using this approach, we found that NusG is an intrinsic termination factor that works single and cooperatively with NusA.
 
Overall design Term-seq on Wild Type, NusA depletion, nusG deletion, and NusA depletion nusG deletion strains of B. subtilis followed by in vitro and physiological follow-up
 
Contributor(s) Mandell ZF, Oshiro RT, Yakhnin AV, Kashlev M, Kearns DB, Babitzke P
Citation(s) 33835023, 35699226
Submission date Jul 15, 2020
Last update date Jul 07, 2022
Contact name Paul Babitzke
E-mail(s) pxb28@psu.edu
Organization name Pennsylvania State University
Street address 203 Althouse Laboratory
City State College
State/province PA
ZIP/Postal code 16802
Country USA
 
Platforms (1)
GPL24109 Illumina NextSeq 500 (Bacillus subtilis)
Samples (8)
GSM4672499 WT-1
GSM4672500 dA-1
GSM4672501 dG-1
Relations
BioProject PRJNA646522
SRA SRP272134

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE154522_RAW.tar 110.6 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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