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Series GSE155044 Query DataSets for GSE155044
Status Public on Aug 11, 2020
Title Premature activation of immune transcription programs in autoimmune-predisposed mouse embryonic stem cells and blastocysts
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To study the underlying mechanism of autoimmunity predisposition in autoimmune-proned mouse strains, we characterize embryonic stem cells derived from various mouse strains.
 
Overall design We performed mRNA-Seq analysis to determine the transcriptional differences between embryonic stem cells derived from auto-immune proned mouse strains.
NOD: autoimmune-prone
 
Contributor(s) Ke E, Kirak O, Ku M
Citation(s) 32796510
Submission date Jul 24, 2020
Last update date Aug 25, 2020
Contact name Manching Ku
Organization name Medical Center - University of Freiburg
Department Hematology and Oncology
Street address Mathildenstrasse 1
City Freiburg
ZIP/Postal code 79106
Country Germany
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (3)
GSM4694098 B6_Blastocyst
GSM4694099 NOD_Blastocyst1
GSM4694100 NOD_Blastocyst2
This SubSeries is part of SuperSeries:
GSE155046 Premature activation of immune transcription programs in autoimmune-predisposed mouse embryonic stem cells and blastocysts
Relations
BioProject PRJNA648327
SRA SRP273414

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE155044_Blastocyst_RNASeq_NOD_B6_Processed_File.xlsx 74.4 Kb (ftp)(http) XLSX
GSE155044_Blastocyst_RNASeq_counts.txt.gz 1.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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