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Series GSE155439 Query DataSets for GSE155439
Status Public on Jul 28, 2023
Title A regulatory circuit for maintenance and regeneration of root patterning
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary We directed expression of BLUEJAY, JACKDAW and SCARECROW through the UAS promoter in the J0571 line and performed cell sorting followed by microarray experiments to identify differentially expressed genes.
 
Overall design Three independent replicates were processed for each control (J0571) and experimental (BLJ-J0571, JKD-J0571 and SCR-J0571). Seedlings were grown for 5 days and root tips were collected. J0571 and J0571-UAS-BIRDS sorted fluorecent cells were harvested for RNA extraction.
 
Contributor(s) Moreno-Risueno M, Sozzani R, Benfey PN
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Submission date Jul 30, 2020
Last update date Jul 28, 2023
Contact name Miguel Angel Moreno-Risueno
E-mail(s) miguelangel.moreno@upm.es
Organization name Center for Plant Biotechnology and Genomics
Department Biotechnology
Lab Specification of new stem cells
Street address C/M-40 s/n
City Pozuelo de Alarcon
State/province Madrid
ZIP/Postal code 28223
Country Spain
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (12)
GSM4704448 Arabidopsis ATH1_ground tissue marker_WT genetic background_first biological replicate
GSM4704449 Arabidopsis ATH1_ground tissue marker_WT genetic background_second biological replicate
GSM4704450 Arabidopsis ATH1_ground tissue marker_WT genetic background_third biological replicate
Relations
BioProject PRJNA649765

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE155439_RAW.tar 19.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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